Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTP4Q96DX8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 AC008556.1-201ENST00000610908 2040 ntBASIC19.09■□□□□ 0.65
RTP4Q96DX8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.09■□□□□ 0.65
RTP4Q96DX8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTP4Q96DX8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTP4Q96DX8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.08■□□□□ 0.65
RTP4Q96DX8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.08■□□□□ 0.65
RTP4Q96DX8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 AL023284.2-201ENST00000405850 579 ntBASIC19.08■□□□□ 0.64
RTP4Q96DX8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RTP4Q96DX8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTP4Q96DX8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
RTP4Q96DX8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.07■□□□□ 0.64
RTP4Q96DX8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTP4Q96DX8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTP4Q96DX8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.07■□□□□ 0.64
RTP4Q96DX8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms