Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 C1QL1P1-201ENST00000568105 661 ntBASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 FZD10-202ENST00000539839 3282 ntBASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 TSPY23P-201ENST00000440136 739 ntBASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 AP002982.1-201ENST00000492365 877 ntBASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCHCR1Q8TD31 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 MIR718-201ENST00000390190 70 ntBASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 AP001412.1-201ENST00000608405 714 ntBASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.49■□□□□ 0.71
CCHCR1Q8TD31 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms