Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 AP000523.1-201ENST00000398242 1049 ntBASIC19.65■□□□□ 0.74
TTC16Q8NEE8 PCED1CP-201ENST00000419887 785 ntBASIC19.65■□□□□ 0.74
TTC16Q8NEE8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 CR769767.2-201ENST00000622735 460 ntBASIC19.65■□□□□ 0.74
TTC16Q8NEE8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 TREX1-205ENST00000625293 1783 ntBASIC19.65■□□□□ 0.74
TTC16Q8NEE8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC16Q8NEE8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.64■□□□□ 0.74
TTC16Q8NEE8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC16Q8NEE8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC16Q8NEE8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TTC16Q8NEE8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.64■□□□□ 0.73
TTC16Q8NEE8 AC112907.2-201ENST00000448639 330 ntBASIC19.64■□□□□ 0.73
TTC16Q8NEE8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 AC007952.6-201ENST00000573168 2673 ntBASIC19.64■□□□□ 0.73
TTC16Q8NEE8 AC003957.1-201ENST00000625108 2673 ntBASIC19.64■□□□□ 0.73
TTC16Q8NEE8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC16Q8NEE8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 AC024243.1-201ENST00000609234 778 ntBASIC19.63■□□□□ 0.73
TTC16Q8NEE8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC16Q8NEE8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms