Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.39■□□□□ 0.21
SEC61A1P61619 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SEC61A1P61619 AC139713.2-201ENST00000641328 2723 ntBASIC16.39■□□□□ 0.21
SEC61A1P61619 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SEC61A1P61619 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 TFP1-202ENST00000475455 1573 ntBASIC16.38■□□□□ 0.21
SEC61A1P61619 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 AL135905.2-201ENST00000584934 1404 ntBASIC16.38■□□□□ 0.21
SEC61A1P61619 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SEC61A1P61619 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SEC61A1P61619 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.38■□□□□ 0.21
SEC61A1P61619 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SEC61A1P61619 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.38■□□□□ 0.21
SEC61A1P61619 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.38■□□□□ 0.21
SEC61A1P61619 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.38■□□□□ 0.21
SEC61A1P61619 AC004264.1-201ENST00000608354 794 ntBASIC16.38■□□□□ 0.21
SEC61A1P61619 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 AP006587.1-201ENST00000534129 1502 ntBASIC16.38■□□□□ 0.21
SEC61A1P61619 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.38■□□□□ 0.21
SEC61A1P61619 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SEC61A1P61619 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61A1P61619 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.37■□□□□ 0.21
SEC61A1P61619 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.37■□□□□ 0.21
SEC61A1P61619 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 AC012313.1-201ENST00000593393 3059 ntBASIC16.37■□□□□ 0.21
SEC61A1P61619 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SEC61A1P61619 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 WIZP1-201ENST00000531444 2299 ntBASIC16.37■□□□□ 0.21
SEC61A1P61619 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SEC61A1P61619 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.37■□□□□ 0.21
SEC61A1P61619 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.37■□□□□ 0.21
SEC61A1P61619 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.37■□□□□ 0.21
SEC61A1P61619 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.37■□□□□ 0.21
SEC61A1P61619 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.37■□□□□ 0.21
SEC61A1P61619 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 PRORSD1P-202ENST00000563365 2154 ntBASIC16.37■□□□□ 0.21
SEC61A1P61619 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.37■□□□□ 0.21
SEC61A1P61619 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.37■□□□□ 0.21
SEC61A1P61619 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61A1P61619 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.36■□□□□ 0.21
SEC61A1P61619 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SEC61A1P61619 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SEC61A1P61619 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.36■□□□□ 0.21
SEC61A1P61619 AF186192.3-201ENST00000583427 947 ntBASIC16.36■□□□□ 0.21
SEC61A1P61619 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.36■□□□□ 0.21
SEC61A1P61619 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.36■□□□□ 0.21
SEC61A1P61619 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.36■□□□□ 0.21
SEC61A1P61619 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms