Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 AP000523.1-201ENST00000398242 1049 ntBASIC17.31■□□□□ 0.36
PER3P56645 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
PER3P56645 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.31■□□□□ 0.36
PER3P56645 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.31■□□□□ 0.36
PER3P56645 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.31■□□□□ 0.36
PER3P56645 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.31■□□□□ 0.36
PER3P56645 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PER3P56645 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PER3P56645 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.3■□□□□ 0.36
PER3P56645 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PER3P56645 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.3■□□□□ 0.36
PER3P56645 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.3■□□□□ 0.36
PER3P56645 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.3■□□□□ 0.36
PER3P56645 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PER3P56645 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PER3P56645 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PER3P56645 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.3■□□□□ 0.36
PER3P56645 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PER3P56645 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PER3P56645 AC092338.2-201ENST00000568827 1415 ntBASIC17.3■□□□□ 0.36
PER3P56645 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
PER3P56645 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.29■□□□□ 0.36
PER3P56645 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PER3P56645 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.29■□□□□ 0.36
PER3P56645 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PER3P56645 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.29■□□□□ 0.36
PER3P56645 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.29■□□□□ 0.36
PER3P56645 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.29■□□□□ 0.36
PER3P56645 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.29■□□□□ 0.36
PER3P56645 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PER3P56645 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.29■□□□□ 0.36
PER3P56645 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.29■□□□□ 0.36
PER3P56645 HLA-A-209ENST00000638375 975 ntBASIC17.29■□□□□ 0.36
PER3P56645 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.29■□□□□ 0.36
PER3P56645 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.29■□□□□ 0.36
PER3P56645 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PER3P56645 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.28■□□□□ 0.36
PER3P56645 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms