Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.46■□□□□ 0.87
CDR1P51861 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.46■□□□□ 0.87
CDR1P51861 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 NEFHP1-201ENST00000412845 2629 ntBASIC20.46■□□□□ 0.87
CDR1P51861 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDR1P51861 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.46■□□□□ 0.87
CDR1P51861 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDR1P51861 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.46■□□□□ 0.87
CDR1P51861 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 TMPOP1-202ENST00000424642 1267 ntBASIC20.46■□□□□ 0.87
CDR1P51861 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.46■□□□□ 0.87
CDR1P51861 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDR1P51861 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDR1P51861 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 AC093484.2-201ENST00000580996 2166 ntBASIC20.46■□□□□ 0.87
CDR1P51861 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.46■□□□□ 0.87
CDR1P51861 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDR1P51861 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDR1P51861 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDR1P51861 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.46■□□□□ 0.87
CDR1P51861 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.46■□□□□ 0.87
CDR1P51861 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CDR1P51861 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CDR1P51861 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
CDR1P51861 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.45■□□□□ 0.86
CDR1P51861 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDR1P51861 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.45■□□□□ 0.86
CDR1P51861 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.45■□□□□ 0.86
CDR1P51861 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.45■□□□□ 0.86
CDR1P51861 AC010203.1-204ENST00000548782 407 ntBASIC20.45■□□□□ 0.86
CDR1P51861 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.45■□□□□ 0.86
CDR1P51861 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.45■□□□□ 0.86
CDR1P51861 AP000692.2-201ENST00000608391 879 ntBASIC20.45■□□□□ 0.86
CDR1P51861 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.45■□□□□ 0.86
CDR1P51861 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.45■□□□□ 0.86
CDR1P51861 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.45■□□□□ 0.86
CDR1P51861 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDR1P51861 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
CDR1P51861 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDR1P51861 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
CDR1P51861 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.44■□□□□ 0.86
CDR1P51861 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.44■□□□□ 0.86
CDR1P51861 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CDR1P51861 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.44■□□□□ 0.86
CDR1P51861 AC005363.2-201ENST00000618631 242 ntBASIC20.44■□□□□ 0.86
CDR1P51861 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.44■□□□□ 0.86
CDR1P51861 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.44■□□□□ 0.86
CDR1P51861 AC104417.2-201ENST00000562989 1793 ntBASIC20.44■□□□□ 0.86
CDR1P51861 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDR1P51861 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
CDR1P51861 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.43■□□□□ 0.86
CDR1P51861 Z82202.1-201ENST00000623446 1880 ntBASIC20.43■□□□□ 0.86
CDR1P51861 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.43■□□□□ 0.86
CDR1P51861 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CDR1P51861 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms