Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CCNFP41002 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.84■□□□□ 0.61
CCNFP41002 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNFP41002 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCNFP41002 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CCNFP41002 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 AL160286.2-201ENST00000567150 934 ntBASIC18.84■□□□□ 0.61
CCNFP41002 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.84■□□□□ 0.61
CCNFP41002 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNFP41002 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNFP41002 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCNFP41002 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.83■□□□□ 0.61
CCNFP41002 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCNFP41002 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.83■□□□□ 0.61
CCNFP41002 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCNFP41002 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCNFP41002 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
CCNFP41002 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCNFP41002 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCNFP41002 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 AC012618.2-201ENST00000428058 849 ntBASIC18.83■□□□□ 0.6
CCNFP41002 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.83■□□□□ 0.6
CCNFP41002 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.83■□□□□ 0.6
CCNFP41002 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.83■□□□□ 0.6
CCNFP41002 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNFP41002 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNFP41002 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.83■□□□□ 0.6
CCNFP41002 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CCNFP41002 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
CCNFP41002 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNFP41002 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNFP41002 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNFP41002 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNFP41002 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNFP41002 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNFP41002 HEIH-201ENST00000623091 1652 ntBASIC18.82■□□□□ 0.6
CCNFP41002 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCNFP41002 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNFP41002 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CCNFP41002 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCNFP41002 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 AC131212.4-201ENST00000623606 975 ntBASIC18.82■□□□□ 0.6
CCNFP41002 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNFP41002 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CCNFP41002 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCNFP41002 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNFP41002 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCNFP41002 KRT16P1-201ENST00000399124 1418 ntBASIC18.82■□□□□ 0.6
CCNFP41002 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNFP41002 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCNFP41002 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
CCNFP41002 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 MIR718-201ENST00000390190 70 ntBASIC18.81■□□□□ 0.6
CCNFP41002 RPS2P55-201ENST00000397318 883 ntBASIC18.81■□□□□ 0.6
CCNFP41002 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.81■□□□□ 0.6
CCNFP41002 AC107956.1-201ENST00000494359 873 ntBASIC18.81■□□□□ 0.6
CCNFP41002 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.81■□□□□ 0.6
CCNFP41002 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNFP41002 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCNFP41002 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.81■□□□□ 0.6
CCNFP41002 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.81■□□□□ 0.6
CCNFP41002 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.81■□□□□ 0.6
CCNFP41002 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms