Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.61■□□□□ 0.57
GABRB3P28472 UBE2SP1-201ENST00000450587 669 ntBASIC18.61■□□□□ 0.57
GABRB3P28472 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRB3P28472 NUDT16P1-203ENST00000513809 620 ntBASIC18.61■□□□□ 0.57
GABRB3P28472 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRB3P28472 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
GABRB3P28472 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRB3P28472 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRB3P28472 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRB3P28472 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRB3P28472 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRB3P28472 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.6■□□□□ 0.57
GABRB3P28472 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRB3P28472 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
GABRB3P28472 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.6■□□□□ 0.57
GABRB3P28472 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRB3P28472 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRB3P28472 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 KRT8P45-201ENST00000414328 1447 ntBASIC18.6■□□□□ 0.57
GABRB3P28472 NOC2LP1-202ENST00000452600 2235 ntBASIC18.6■□□□□ 0.57
GABRB3P28472 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRB3P28472 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRB3P28472 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRB3P28472 AC233702.5-201ENST00000584107 538 ntBASIC18.6■□□□□ 0.57
GABRB3P28472 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 AL133373.2-201ENST00000623187 2828 ntBASIC18.6■□□□□ 0.57
GABRB3P28472 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GABRB3P28472 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GABRB3P28472 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRB3P28472 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
GABRB3P28472 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.59■□□□□ 0.57
GABRB3P28472 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
GABRB3P28472 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
GABRB3P28472 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.59■□□□□ 0.57
GABRB3P28472 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 AL109659.2-201ENST00000606809 1674 ntBASIC18.59■□□□□ 0.57
GABRB3P28472 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.59■□□□□ 0.57
GABRB3P28472 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRB3P28472 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.58■□□□□ 0.57
GABRB3P28472 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABRB3P28472 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.58■□□□□ 0.57
GABRB3P28472 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
GABRB3P28472 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
GABRB3P28472 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.58■□□□□ 0.57
GABRB3P28472 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GABRB3P28472 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GABRB3P28472 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABRB3P28472 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.58■□□□□ 0.56
GABRB3P28472 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRB3P28472 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GABRB3P28472 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GABRB3P28472 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.58■□□□□ 0.56
GABRB3P28472 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRB3P28472 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.58■□□□□ 0.56
GABRB3P28472 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.58■□□□□ 0.56
GABRB3P28472 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.58■□□□□ 0.56
GABRB3P28472 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
GABRB3P28472 Z99916.2-201ENST00000604037 246 ntBASIC18.58■□□□□ 0.56
GABRB3P28472 REXO1L10P-201ENST00000615707 1290 ntBASIC18.58■□□□□ 0.56
GABRB3P28472 REXO1L12P-201ENST00000622156 912 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms