Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.38■□□□□ 0.85
RFX1P22670 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RFX1P22670 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
RFX1P22670 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RFX1P22670 KRT8P3-201ENST00000519669 1449 ntBASIC20.37■□□□□ 0.85
RFX1P22670 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
RFX1P22670 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.37■□□□□ 0.85
RFX1P22670 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 ANO7L1-203ENST00000602586 1720 ntBASIC20.37■□□□□ 0.85
RFX1P22670 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
RFX1P22670 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.37■□□□□ 0.85
RFX1P22670 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RFX1P22670 ECEL1P2-202ENST00000465689 757 ntBASIC20.37■□□□□ 0.85
RFX1P22670 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.37■□□□□ 0.85
RFX1P22670 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.37■□□□□ 0.85
RFX1P22670 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RFX1P22670 AC006011.2-201ENST00000621313 1158 ntBASIC20.37■□□□□ 0.85
RFX1P22670 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RFX1P22670 HEIH-201ENST00000623091 1652 ntBASIC20.37■□□□□ 0.85
RFX1P22670 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 HCG11-201ENST00000411553 5696 ntBASIC20.37■□□□□ 0.85
RFX1P22670 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.37■□□□□ 0.85
RFX1P22670 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
RFX1P22670 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.37■□□□□ 0.85
RFX1P22670 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX1P22670 FSCN1P1-201ENST00000568912 1481 ntBASIC20.37■□□□□ 0.85
RFX1P22670 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RFX1P22670 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RFX1P22670 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.36■□□□□ 0.85
RFX1P22670 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RFX1P22670 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFX1P22670 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX1P22670 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFX1P22670 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
RFX1P22670 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX1P22670 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 AL358472.4-201ENST00000633140 710 ntBASIC20.36■□□□□ 0.85
RFX1P22670 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RFX1P22670 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX1P22670 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX1P22670 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.35■□□□□ 0.85
RFX1P22670 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
RFX1P22670 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX1P22670 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.35■□□□□ 0.85
RFX1P22670 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.35■□□□□ 0.85
RFX1P22670 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RFX1P22670 TPM4P1-201ENST00000436100 807 ntBASIC20.35■□□□□ 0.85
RFX1P22670 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.35■□□□□ 0.85
RFX1P22670 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 AC022616.7-201ENST00000525383 220 ntBASIC20.35■□□□□ 0.85
RFX1P22670 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RFX1P22670 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.35■□□□□ 0.85
RFX1P22670 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.35■□□□□ 0.85
RFX1P22670 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX1P22670 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX1P22670 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RFX1P22670 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RFX1P22670 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 BX664615.1-201ENST00000443558 458 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms