Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 GCSHP5-201ENST00000443090 522 ntBASIC18.95■□□□□ 0.62
USP1O94782 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USP1O94782 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.95■□□□□ 0.62
USP1O94782 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.95■□□□□ 0.62
USP1O94782 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.95■□□□□ 0.62
USP1O94782 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.95■□□□□ 0.62
USP1O94782 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 KRT8P32-201ENST00000512863 1461 ntBASIC18.95■□□□□ 0.62
USP1O94782 AC073592.3-201ENST00000625118 1834 ntBASIC18.95■□□□□ 0.62
USP1O94782 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.95■□□□□ 0.62
USP1O94782 HCG11-201ENST00000411553 5696 ntBASIC18.95■□□□□ 0.62
USP1O94782 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.95■□□□□ 0.62
USP1O94782 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 MTMR9LP-203ENST00000426597 1545 ntBASIC18.95■□□□□ 0.62
USP1O94782 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP1O94782 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
USP1O94782 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP1O94782 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.94■□□□□ 0.62
USP1O94782 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 BICD1-207ENST00000551848 1962 ntBASIC18.94■□□□□ 0.62
USP1O94782 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.94■□□□□ 0.62
USP1O94782 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.94■□□□□ 0.62
USP1O94782 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.94■□□□□ 0.62
USP1O94782 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 AC098590.1-201ENST00000468126 897 ntBASIC18.94■□□□□ 0.62
USP1O94782 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.94■□□□□ 0.62
USP1O94782 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP1O94782 RARRES2P10-201ENST00000564312 460 ntBASIC18.94■□□□□ 0.62
USP1O94782 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
USP1O94782 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.94■□□□□ 0.62
USP1O94782 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 AL031985.4-201ENST00000642138 673 ntBASIC18.94■□□□□ 0.62
USP1O94782 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
USP1O94782 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.94■□□□□ 0.62
USP1O94782 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
USP1O94782 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP1O94782 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
USP1O94782 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.93■□□□□ 0.62
USP1O94782 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP1O94782 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.93■□□□□ 0.62
USP1O94782 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
USP1O94782 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
USP1O94782 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.93■□□□□ 0.62
USP1O94782 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.93■□□□□ 0.62
USP1O94782 AL359736.2-201ENST00000621992 437 ntBASIC18.93■□□□□ 0.62
USP1O94782 FAM197Y4-202ENST00000622692 608 ntBASIC18.93■□□□□ 0.62
USP1O94782 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
USP1O94782 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP1O94782 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP1O94782 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
USP1O94782 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
USP1O94782 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP1O94782 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
USP1O94782 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.92■□□□□ 0.62
USP1O94782 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.92■□□□□ 0.62
USP1O94782 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 AC142381.4-202ENST00000563973 229 ntBASIC18.92■□□□□ 0.62
USP1O94782 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms