Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 AC104076.2-201ENST00000448912 469 ntBASIC15.39■□□□□ 0.05
A0A1W2PRF3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 MIR4674-201ENST00000582457 87 ntBASIC15.39■□□□□ 0.05
A0A1W2PRF3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 AC010653.2-201ENST00000623505 997 ntBASIC15.39■□□□□ 0.05
A0A1W2PRF3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 AL049812.1-201ENST00000432563 2267 ntBASIC15.38■□□□□ 0.05
A0A1W2PRF3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 AC005332.7-201ENST00000614046 2005 ntBASIC15.38■□□□□ 0.05
A0A1W2PRF3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 AC139887.4-201ENST00000607877 719 ntBASIC15.38■□□□□ 0.05
A0A1W2PRF3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.38■□□□□ 0.05
A0A1W2PRF3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.38■□□□□ 0.05
A0A1W2PRF3 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.38■□□□□ 0.05
A0A1W2PRF3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
A0A1W2PRF3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 AC073508.3-201ENST00000619697 1419 ntBASIC15.37■□□□□ 0.05
A0A1W2PRF3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.37■□□□□ 0.05
A0A1W2PRF3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.37■□□□□ 0.05
A0A1W2PRF3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.37■□□□□ 0.05
A0A1W2PRF3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
A0A1W2PRF3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms