Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 AC116351.2-201ENST00000606540 1585 ntBASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 AC024257.2-201ENST00000549699 147 ntBASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 SDHAP1-207ENST00000440850 2000 ntBASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 AC135279.3-201ENST00000610945 1311 ntBASIC12.36□□□□□ -0.43
TRAV13-2A0A0B4J235 AC104417.2-201ENST00000562989 1793 ntBASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms