Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 AC008894.3-201ENST00000624324 3103 ntBASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 AL121829.2-201ENST00000620908 328 ntBASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 AC124283.5-201ENST00000624661 1809 ntBASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
R3HCC1Q9Y3T6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
R3HCC1Q9Y3T6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 FAM197Y4-202ENST00000622692 608 ntBASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 PHGDH-210ENST00000641115 1638 ntBASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
R3HCC1Q9Y3T6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 C1QBPP2-201ENST00000528754 825 ntBASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
R3HCC1Q9Y3T6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms