Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TNNQ9UQP3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC23.84■■□□□ 1.41
TNNQ9UQP3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.84■■□□□ 1.41
TNNQ9UQP3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 AC092338.2-201ENST00000568827 1415 ntBASIC23.84■■□□□ 1.41
TNNQ9UQP3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNNQ9UQP3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNNQ9UQP3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNNQ9UQP3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNNQ9UQP3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNNQ9UQP3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNNQ9UQP3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TNNQ9UQP3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNNQ9UQP3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
TNNQ9UQP3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TNNQ9UQP3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TNNQ9UQP3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TNNQ9UQP3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 AC036111.1-201ENST00000533973 1582 ntBASIC23.82■■□□□ 1.4
TNNQ9UQP3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.82■■□□□ 1.4
TNNQ9UQP3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.82■■□□□ 1.4
TNNQ9UQP3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.82■■□□□ 1.4
TNNQ9UQP3 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.82■■□□□ 1.4
TNNQ9UQP3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.82■■□□□ 1.4
TNNQ9UQP3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.82■■□□□ 1.4
TNNQ9UQP3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNNQ9UQP3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TNNQ9UQP3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
TNNQ9UQP3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.81■■□□□ 1.4
TNNQ9UQP3 AC007663.1-201ENST00000438948 1240 ntBASIC23.81■■□□□ 1.4
TNNQ9UQP3 BX088651.1-201ENST00000540551 451 ntBASIC23.81■■□□□ 1.4
TNNQ9UQP3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
TNNQ9UQP3 AC090164.3-201ENST00000610780 2143 ntBASIC23.81■■□□□ 1.4
TNNQ9UQP3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNNQ9UQP3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNNQ9UQP3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNNQ9UQP3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNNQ9UQP3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNNQ9UQP3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNNQ9UQP3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNNQ9UQP3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.8■■□□□ 1.4
TNNQ9UQP3 AL109659.2-201ENST00000606809 1674 ntBASIC23.79■■□□□ 1.4
TNNQ9UQP3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNNQ9UQP3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNNQ9UQP3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 CA15P1-201ENST00000481698 905 ntBASIC23.79■■□□□ 1.4
TNNQ9UQP3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 AL353719.1-201ENST00000566847 864 ntBASIC23.79■■□□□ 1.4
TNNQ9UQP3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TNNQ9UQP3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNNQ9UQP3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms