Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 MRPL3P1-201ENST00000400109 1033 ntBASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 AC106795.1-205ENST00000512851 1056 ntBASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 AL353801.3-201ENST00000609898 542 ntBASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 AC023511.2-201ENST00000618803 211 ntBASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 AC006333.2-201ENST00000607957 2099 ntBASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRMT13Q9NUP7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 GPR32P1-201ENST00000601788 811 ntBASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 AL121912.1-201ENST00000603683 238 ntBASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 KRT8P32-201ENST00000512863 1461 ntBASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT13Q9NUP7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 Z69720.1-201ENST00000601483 472 ntBASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 AC004263.2-201ENST00000617183 678 ntBASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT13Q9NUP7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 IGHGP-201ENST00000390555 1178 ntBASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 IGHV3-47-201ENST00000425060 335 ntBASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 AL592071.1-201ENST00000611956 408 ntBASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 AC034236.2-201ENST00000606662 1610 ntBASIC20.52■□□□□ 0.88
TRMT13Q9NUP7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.52■□□□□ 0.87
TRMT13Q9NUP7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRMT13Q9NUP7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.51■□□□□ 0.87
TRMT13Q9NUP7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms