Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS2Q99743 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS2Q99743 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS2Q99743 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NPAS2Q99743 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.36■□□□□ 0.53
NPAS2Q99743 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS2Q99743 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS2Q99743 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS2Q99743 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 NBPF21P-201ENST00000425093 1451 ntBASIC18.35■□□□□ 0.53
NPAS2Q99743 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAS2Q99743 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAS2Q99743 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
NPAS2Q99743 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 RARRES2P10-201ENST00000564312 460 ntBASIC18.35■□□□□ 0.53
NPAS2Q99743 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS2Q99743 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS2Q99743 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS2Q99743 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS2Q99743 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS2Q99743 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NPAS2Q99743 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS2Q99743 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPAS2Q99743 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPAS2Q99743 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPAS2Q99743 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 TSPY7P-201ENST00000431358 1114 ntBASIC18.34■□□□□ 0.53
NPAS2Q99743 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS2Q99743 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS2Q99743 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NPAS2Q99743 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.34■□□□□ 0.53
NPAS2Q99743 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS2Q99743 AL049637.2-201ENST00000641778 930 ntBASIC18.34■□□□□ 0.53
NPAS2Q99743 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS2Q99743 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS2Q99743 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 AC067852.2-201ENST00000590513 2313 ntBASIC18.34■□□□□ 0.53
NPAS2Q99743 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS2Q99743 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
NPAS2Q99743 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NPAS2Q99743 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS2Q99743 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS2Q99743 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.33■□□□□ 0.53
NPAS2Q99743 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS2Q99743 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS2Q99743 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS2Q99743 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NPAS2Q99743 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS2Q99743 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS2Q99743 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms