Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ABALON-201ENST00000629058 1903 ntBASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 AC067930.6-201ENST00000623257 4947 ntBASIC9.13□□□□□ -0.95
PRAC1Q96KF2 AC118758.2-201ENST00000614242 2813 ntBASIC9.13□□□□□ -0.95
PRAC1Q96KF2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 LYSMD4-203ENST00000378904 2122 ntBASIC9.13□□□□□ -0.95
PRAC1Q96KF2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC9.13□□□□□ -0.95
PRAC1Q96KF2 AC126335.2-201ENST00000623362 4637 ntBASIC9.12□□□□□ -0.95
PRAC1Q96KF2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 AC007950.2-201ENST00000615045 2347 ntBASIC9.12□□□□□ -0.95
PRAC1Q96KF2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 AC067750.1-201ENST00000608826 6545 ntBASIC9.12□□□□□ -0.95
PRAC1Q96KF2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PRAC1Q96KF2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms