Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.63■□□□□ 0.57
CKAP2Q8WWK9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC124067.4-201ENST00000519691 2379 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 TUBB8P6-201ENST00000436895 1288 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC034268.1-201ENST00000441047 882 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC137761.2-201ENST00000561729 223 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC145350.3-201ENST00000569033 163 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 MYC-208ENST00000641036 567 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC068587.9-201ENST00000641814 219 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC108860.2-201ENST00000562760 2183 ntBASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKAP2Q8WWK9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 REXO1L9P-201ENST00000604264 2108 ntBASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CKAP2Q8WWK9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.6■□□□□ 0.57
CKAP2Q8WWK9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms