Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 AC006058.3-201ENST00000606217 1069 ntBASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 AC073648.6-201ENST00000641589 218 ntBASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 CD99P1-205ENST00000527459 561 ntBASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 RCC2P6-201ENST00000526625 1557 ntBASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN22Q8N7P3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN22Q8N7P3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN22Q8N7P3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.07■□□□□ 0.32
CLDN22Q8N7P3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms