Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 HOXB1-202ENST00000577092 1414 ntBASIC20.63■□□□□ 0.89
NME8Q8N427 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.63■□□□□ 0.89
NME8Q8N427 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 ATP5G2P1-201ENST00000433580 426 ntBASIC20.63■□□□□ 0.89
NME8Q8N427 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NME8Q8N427 KRT126P-201ENST00000549467 1181 ntBASIC20.63■□□□□ 0.89
NME8Q8N427 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.63■□□□□ 0.89
NME8Q8N427 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NME8Q8N427 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.63■□□□□ 0.89
NME8Q8N427 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME8Q8N427 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NME8Q8N427 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.62■□□□□ 0.89
NME8Q8N427 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 AC008556.1-201ENST00000610908 2040 ntBASIC20.62■□□□□ 0.89
NME8Q8N427 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
NME8Q8N427 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NME8Q8N427 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.62■□□□□ 0.89
NME8Q8N427 MIR564-202ENST00000385049 94 ntBASIC20.62■□□□□ 0.89
NME8Q8N427 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.62■□□□□ 0.89
NME8Q8N427 HLA-F-220ENST00000434407 884 ntBASIC20.62■□□□□ 0.89
NME8Q8N427 HCG4P8-203ENST00000443049 980 ntBASIC20.62■□□□□ 0.89
NME8Q8N427 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NME8Q8N427 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.62■□□□□ 0.89
NME8Q8N427 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NME8Q8N427 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NME8Q8N427 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 IRX1P1-201ENST00000438849 1838 ntBASIC20.62■□□□□ 0.89
NME8Q8N427 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME8Q8N427 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
NME8Q8N427 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.61■□□□□ 0.89
NME8Q8N427 FP475955.4-201ENST00000623131 1990 ntBASIC20.61■□□□□ 0.89
NME8Q8N427 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.61■□□□□ 0.89
NME8Q8N427 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 KRT18P23-201ENST00000435622 1283 ntBASIC20.61■□□□□ 0.89
NME8Q8N427 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.61■□□□□ 0.89
NME8Q8N427 AC104390.1-201ENST00000555663 520 ntBASIC20.61■□□□□ 0.89
NME8Q8N427 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.61■□□□□ 0.89
NME8Q8N427 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NME8Q8N427 AL157888.1-201ENST00000631930 593 ntBASIC20.61■□□□□ 0.89
NME8Q8N427 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NME8Q8N427 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME8Q8N427 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 AC141586.3-201ENST00000562166 1838 ntBASIC20.6■□□□□ 0.89
NME8Q8N427 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NME8Q8N427 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.6■□□□□ 0.89
NME8Q8N427 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NME8Q8N427 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.6■□□□□ 0.89
NME8Q8N427 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.6■□□□□ 0.89
NME8Q8N427 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
NME8Q8N427 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.6■□□□□ 0.89
NME8Q8N427 AC011498.5-201ENST00000592027 486 ntBASIC20.6■□□□□ 0.89
NME8Q8N427 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.6■□□□□ 0.89
NME8Q8N427 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NME8Q8N427 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NME8Q8N427 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.59■□□□□ 0.89
NME8Q8N427 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms