Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX2P50458 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX2P50458 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX2P50458 AC112907.2-201ENST00000448639 330 ntBASIC16.75■□□□□ 0.27
LHX2P50458 RASA4DP-201ENST00000460726 1199 ntBASIC16.75■□□□□ 0.27
LHX2P50458 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.75■□□□□ 0.27
LHX2P50458 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX2P50458 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX2P50458 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX2P50458 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX2P50458 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX2P50458 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LHX2P50458 MTMR9LP-203ENST00000426597 1545 ntBASIC16.75■□□□□ 0.27
LHX2P50458 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.75■□□□□ 0.27
LHX2P50458 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX2P50458 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.75■□□□□ 0.27
LHX2P50458 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.75■□□□□ 0.27
LHX2P50458 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LHX2P50458 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LHX2P50458 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.74■□□□□ 0.27
LHX2P50458 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LHX2P50458 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
LHX2P50458 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.74■□□□□ 0.27
LHX2P50458 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.74■□□□□ 0.27
LHX2P50458 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.74■□□□□ 0.27
LHX2P50458 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.74■□□□□ 0.27
LHX2P50458 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.74■□□□□ 0.27
LHX2P50458 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 HYMAI.1-201ENST00000620949 238 ntBASIC16.74■□□□□ 0.27
LHX2P50458 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
LHX2P50458 AL357033.4-201ENST00000617703 1807 ntBASIC16.74■□□□□ 0.27
LHX2P50458 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.74■□□□□ 0.27
LHX2P50458 AC006333.2-201ENST00000607957 2099 ntBASIC16.74■□□□□ 0.27
LHX2P50458 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LHX2P50458 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
LHX2P50458 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LHX2P50458 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LHX2P50458 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.73■□□□□ 0.27
LHX2P50458 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LHX2P50458 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.73■□□□□ 0.27
LHX2P50458 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LHX2P50458 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 AC104390.1-201ENST00000555663 520 ntBASIC16.73■□□□□ 0.27
LHX2P50458 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
LHX2P50458 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.73■□□□□ 0.27
LHX2P50458 AL121956.5-201ENST00000625261 221 ntBASIC16.73■□□□□ 0.27
LHX2P50458 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LHX2P50458 Z98044.1-201ENST00000632503 1764 ntBASIC16.73■□□□□ 0.27
LHX2P50458 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LHX2P50458 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LHX2P50458 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LHX2P50458 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.73■□□□□ 0.27
LHX2P50458 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LHX2P50458 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.72■□□□□ 0.27
LHX2P50458 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.72■□□□□ 0.27
LHX2P50458 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
LHX2P50458 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.72■□□□□ 0.27
LHX2P50458 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
LHX2P50458 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.72■□□□□ 0.27
LHX2P50458 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.72■□□□□ 0.27
LHX2P50458 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.72■□□□□ 0.27
LHX2P50458 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.72■□□□□ 0.27
LHX2P50458 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.72■□□□□ 0.27
LHX2P50458 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LHX2P50458 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms