Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.69■□□□□ 0.58
CBX6O95503 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX6O95503 LINC01023-201ENST00000606054 436 ntBASIC18.69■□□□□ 0.58
CBX6O95503 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CBX6O95503 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX6O95503 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX6O95503 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CBX6O95503 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX6O95503 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CBX6O95503 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CBX6O95503 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.68■□□□□ 0.58
CBX6O95503 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.68■□□□□ 0.58
CBX6O95503 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CBX6O95503 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.68■□□□□ 0.58
CBX6O95503 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX6O95503 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CBX6O95503 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.68■□□□□ 0.58
CBX6O95503 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX6O95503 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX6O95503 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX6O95503 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CBX6O95503 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX6O95503 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 KRT18P68-201ENST00000392293 1000 ntBASIC18.67■□□□□ 0.58
CBX6O95503 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.67■□□□□ 0.58
CBX6O95503 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX6O95503 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.67■□□□□ 0.58
CBX6O95503 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX6O95503 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CBX6O95503 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX6O95503 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CBX6O95503 AC069544.1-201ENST00000609399 999 ntBASIC18.67■□□□□ 0.58
CBX6O95503 AC010331.1-201ENST00000611423 582 ntBASIC18.67■□□□□ 0.58
CBX6O95503 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX6O95503 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX6O95503 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX6O95503 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 ESPNP-201ENST00000270691 2015 ntBASIC18.66■□□□□ 0.58
CBX6O95503 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CBX6O95503 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.66■□□□□ 0.58
CBX6O95503 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CBX6O95503 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX6O95503 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX6O95503 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CBX6O95503 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX6O95503 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX6O95503 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CBX6O95503 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CBX6O95503 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CBX6O95503 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.66■□□□□ 0.58
CBX6O95503 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX6O95503 SDHAP1-207ENST00000440850 2000 ntBASIC18.66■□□□□ 0.58
CBX6O95503 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CBX6O95503 AC009053.2-201ENST00000563701 2365 ntBASIC18.66■□□□□ 0.58
CBX6O95503 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.65■□□□□ 0.58
CBX6O95503 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms