Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
VAPBO95292 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.86■□□□□ 0.61
VAPBO95292 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.86■□□□□ 0.61
VAPBO95292 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.86■□□□□ 0.61
VAPBO95292 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VAPBO95292 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.86■□□□□ 0.61
VAPBO95292 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VAPBO95292 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.86■□□□□ 0.61
VAPBO95292 AC068587.9-201ENST00000641814 219 ntBASIC18.86■□□□□ 0.61
VAPBO95292 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 KRT8P32-201ENST00000512863 1461 ntBASIC18.85■□□□□ 0.61
VAPBO95292 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VAPBO95292 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VAPBO95292 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 ABHD17AP1-201ENST00000358206 933 ntBASIC18.85■□□□□ 0.61
VAPBO95292 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 RPS2P55-201ENST00000397318 883 ntBASIC18.85■□□□□ 0.61
VAPBO95292 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 AC107956.1-201ENST00000494359 873 ntBASIC18.85■□□□□ 0.61
VAPBO95292 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.85■□□□□ 0.61
VAPBO95292 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPBO95292 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.85■□□□□ 0.61
VAPBO95292 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.85■□□□□ 0.61
VAPBO95292 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.85■□□□□ 0.61
VAPBO95292 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VAPBO95292 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VAPBO95292 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
VAPBO95292 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPBO95292 MTMR9LP-203ENST00000426597 1545 ntBASIC18.84■□□□□ 0.61
VAPBO95292 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
VAPBO95292 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.84■□□□□ 0.61
VAPBO95292 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.84■□□□□ 0.61
VAPBO95292 AP000692.2-201ENST00000608391 879 ntBASIC18.84■□□□□ 0.61
VAPBO95292 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPBO95292 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VAPBO95292 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPBO95292 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.83■□□□□ 0.61
VAPBO95292 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VAPBO95292 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.83■□□□□ 0.61
VAPBO95292 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VAPBO95292 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.83■□□□□ 0.61
VAPBO95292 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.61
VAPBO95292 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VAPBO95292 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.83■□□□□ 0.61
VAPBO95292 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms