Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 CHRD-204ENST00000420973 3492 ntTSL 1 (best)15.77■□□□□ 0.122e-6■□□□□ 9.7
SMNDC1O75940 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.042e-6■□□□□ 9.7
SMNDC1O75940 CHRD-212ENST00000470150 4234 ntTSL 214.43□□□□□ -0.12e-6■□□□□ 9.7
SMNDC1O75940 DHX9-207ENST00000485081 2531 ntTSL 211.88□□□□□ -0.514e-6■□□□□ 9.7
SMNDC1O75940 DHX9-203ENST00000474446 848 ntTSL 37.82□□□□□ -1.164e-6■□□□□ 9.7
SMNDC1O75940 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.164e-12■□□□□ 9.7
SMNDC1O75940 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.07□□□□□ -0.164e-12■□□□□ 9.7
SMNDC1O75940 FTH1-206ENST00000530019 550 ntTSL 414.07□□□□□ -0.164e-12■□□□□ 9.7
SMNDC1O75940 FTH1-211ENST00000534719 788 ntTSL 1 (best)12.37□□□□□ -0.434e-12■□□□□ 9.7
SMNDC1O75940 FTH1-210ENST00000534180 983 ntTSL 212.1□□□□□ -0.474e-12■□□□□ 9.7
SMNDC1O75940 FTH1-208ENST00000532829 912 ntTSL 211.4□□□□□ -0.584e-12■□□□□ 9.7
SMNDC1O75940 FTH1-205ENST00000529631 507 ntTSL 4 BASIC11.34□□□□□ -0.594e-12■□□□□ 9.7
SMNDC1O75940 FTH1-209ENST00000533138 885 ntTSL 510.27□□□□□ -0.774e-12■□□□□ 9.7
SMNDC1O75940 FTH1-203ENST00000529191 530 ntTSL 2 BASIC10.09□□□□□ -0.794e-12■□□□□ 9.7
SMNDC1O75940 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.52□□□□□ -1.054e-12■□□□□ 9.7
SMNDC1O75940 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.184e-12■□□□□ 9.7
SMNDC1O75940 FASN-211ENST00000637026 100 ntTSL 59.22□□□□□ -0.937e-12■□□□□ 9.7
SMNDC1O75940 KLHL24-203ENST00000437402 563 ntTSL 519.83■□□□□ 0.773e-8■□□□□ 9.7
SMNDC1O75940 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.622e-7■□□□□ 9.7
SMNDC1O75940 KLHL24-212ENST00000481126 389 ntTSL 218.75■□□□□ 0.593e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-213ENST00000482138 588 ntTSL 418.75■□□□□ 0.593e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-215ENST00000493074 627 ntTSL 418.75■□□□□ 0.593e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.573e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-204ENST00000454495 603 ntTSL 318.47■□□□□ 0.553e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-202ENST00000427201 562 ntTSL 417.7■□□□□ 0.423e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-206ENST00000461813 587 ntTSL 417.7■□□□□ 0.423e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.52■□□□□ 0.43e-8■□□□□ 9.7
SMNDC1O75940 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.362e-7■□□□□ 9.7
SMNDC1O75940 KLHL24-209ENST00000473045 542 ntTSL 417.02■□□□□ 0.323e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-202ENST00000417750 2334 ntTSL 216.83■□□□□ 0.283e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-205ENST00000547670 1866 ntTSL 1 (best)16.5■□□□□ 0.233e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-203ENST00000457164 1081 ntTSL 215.93■□□□□ 0.143e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-206ENST00000547675 581 ntTSL 515.93■□□□□ 0.143e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-208ENST00000468101 574 ntTSL 415.92■□□□□ 0.143e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-225ENST00000552153 549 ntTSL 415.4■□□□□ 0.063e-8■□□□□ 9.7
SMNDC1O75940 KLHL24-210ENST00000475827 545 ntTSL 414.2□□□□□ -0.143e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.163e-8■□□□□ 9.7
SMNDC1O75940 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.67□□□□□ -0.223e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-216ENST00000550867 2800 ntTSL 1 (best)13.64□□□□□ -0.233e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-227ENST00000552577 2083 ntTSL 212.74□□□□□ -0.373e-8■□□□□ 9.7
SMNDC1O75940 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-8■□□□□ 9.7
SMNDC1O75940 ARID1A-206ENST00000466382 2699 ntTSL 212.57□□□□□ -0.42e-7■□□□□ 9.7
SMNDC1O75940 ARID1A-212ENST00000636219 7058 ntAPPRIS ALT2 TSL 511.58□□□□□ -0.562e-7■□□□□ 9.7
SMNDC1O75940 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.613e-8■□□□□ 9.7
SMNDC1O75940 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.642e-7■□□□□ 9.7
SMNDC1O75940 LMBR1L-230ENST00000553204 582 ntTSL 311□□□□□ -0.653e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.743e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.763e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.773e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-214ENST00000467200 3634 ntAPPRIS ALT2 TSL 1 (best)10.24□□□□□ -0.773e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.773e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.823e-8■□□□□ 9.7
SMNDC1O75940 CAD-211ENST00000491891 662 ntTSL 39.9□□□□□ -0.823e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.833e-8■□□□□ 9.7
SMNDC1O75940 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.912e-7■□□□□ 9.7
SMNDC1O75940 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.943e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-215ENST00000468376 4064 ntTSL 1 (best)9.05□□□□□ -0.963e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.963e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-213ENST00000549730 585 ntTSL 59□□□□□ -0.973e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-224ENST00000552141 756 ntTSL 28.83□□□□□ -13e-8■□□□□ 9.7
SMNDC1O75940 HDAC7-229ENST00000549883 537 ntTSL 38.77□□□□□ -1.013e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.013e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.013e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.62□□□□□ -1.033e-8■□□□□ 9.7
SMNDC1O75940 LMBR1L-219ENST00000551169 771 ntTSL 58.55□□□□□ -1.043e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.073e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.093e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.13e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.123e-8■□□□□ 9.7
SMNDC1O75940 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.173e-8■□□□□ 9.7
SMNDC1O75940 FKBP10-207ENST00000490938 837 ntTSL 214.13□□□□□ -0.154e-14■□□□□ 9.7
SMNDC1O75940 SNHG25-201ENST00000580828 106 ntTSL 210.91□□□□□ -0.661e-323■□□□□ 9.7
SMNDC1O75940 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.88■□□□□ 0.772e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-226ENST00000631619 2457 ntTSL 519.15■□□□□ 0.662e-16■□□□□ 9.6
SMNDC1O75940 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.363e-10■□□□□ 9.6
SMNDC1O75940 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.092e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)14.22□□□□□ -0.132e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-212ENST00000470121 1889 ntTSL 1 (best)13.44□□□□□ -0.262e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-219ENST00000477127 1464 ntTSL 513.21□□□□□ -0.32e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-217ENST00000476367 1603 ntTSL 1 (best)12.82□□□□□ -0.362e-16■□□□□ 9.6
SMNDC1O75940 TUBA1C-209ENST00000552448 1800 ntTSL 311.96□□□□□ -0.493e-10■□□□□ 9.6
SMNDC1O75940 PRRC2A-211ENST00000484787 756 ntTSL 211.93□□□□□ -0.56e-8■□□□□ 9.6
SMNDC1O75940 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC10.98□□□□□ -0.653e-10■□□□□ 9.6
SMNDC1O75940 PRRC2A-203ENST00000460302 697 ntTSL 310.49□□□□□ -0.736e-8■□□□□ 9.6
SMNDC1O75940 TUBA1C-208ENST00000552125 575 ntTSL 49.63□□□□□ -0.873e-10■□□□□ 9.6
SMNDC1O75940 TUBA1C-206ENST00000549818 536 ntTSL 48.43□□□□□ -1.063e-10■□□□□ 9.6
SMNDC1O75940 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC8.27□□□□□ -1.093e-10■□□□□ 9.6
SMNDC1O75940 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.26□□□□□ -1.093e-10■□□□□ 9.6
SMNDC1O75940 CCNL1-206ENST00000464679 534 ntTSL 38.14□□□□□ -1.112e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-224ENST00000483789 667 ntTSL 27.08□□□□□ -1.282e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-221ENST00000479052 458 ntTSL 34.83□□□□□ -1.642e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-215ENST00000474539 4799 ntTSL 1 (best)4.4□□□□□ -1.712e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-204ENST00000464316 3843 ntTSL 1 (best)4.24□□□□□ -1.732e-16■□□□□ 9.6
SMNDC1O75940 CCNL1-214ENST00000471247 3671 ntTSL 1 (best)3.4□□□□□ -1.872e-16■□□□□ 9.6
SMNDC1O75940 RACK1-205ENST00000502905 643 ntTSL 39.12□□□□□ -0.951e-323■□□□□ 9.6
SMNDC1O75940 RACK1-204ENST00000502890 705 ntTSL 39.01□□□□□ -0.971e-323■□□□□ 9.6
SMNDC1O75940 RACK1-217ENST00000507756 889 ntTSL 57.74□□□□□ -1.171e-323■□□□□ 9.6
SMNDC1O75940 SNORD96A-201ENST00000606577 79 ntBASIC5.9□□□□□ -1.461e-323■□□□□ 9.6
SMNDC1O75940 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.53■□□□□ 0.723e-18■□□□□ 9.6
SMNDC1O75940 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)17.36■□□□□ 0.373e-18■□□□□ 9.6
Retrieved 100 of 11,362 protein–RNA pairs in 206.9 ms