Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CNOT3O75175 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNOT3O75175 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 AC096733.2-201ENST00000609937 1394 ntBASIC18.17■□□□□ 0.5
CNOT3O75175 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CNOT3O75175 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CNOT3O75175 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNOT3O75175 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
CNOT3O75175 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNOT3O75175 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CNOT3O75175 MFAP1P1-201ENST00000442257 1255 ntBASIC18.17■□□□□ 0.5
CNOT3O75175 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.17■□□□□ 0.5
CNOT3O75175 ECEL1P2-202ENST00000465689 757 ntBASIC18.17■□□□□ 0.5
CNOT3O75175 C2orf69P3-201ENST00000565542 1120 ntBASIC18.17■□□□□ 0.5
CNOT3O75175 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNOT3O75175 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CNOT3O75175 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 KRT8P41-201ENST00000533985 1514 ntBASIC18.17■□□□□ 0.5
CNOT3O75175 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT3O75175 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
CNOT3O75175 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.16■□□□□ 0.5
CNOT3O75175 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CNOT3O75175 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CNOT3O75175 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CNOT3O75175 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CNOT3O75175 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.16■□□□□ 0.5
CNOT3O75175 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 EGLN1P1-201ENST00000531623 762 ntBASIC18.16■□□□□ 0.5
CNOT3O75175 AC010203.1-204ENST00000548782 407 ntBASIC18.16■□□□□ 0.5
CNOT3O75175 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.16■□□□□ 0.5
CNOT3O75175 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CNOT3O75175 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT3O75175 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT3O75175 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CNOT3O75175 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CNOT3O75175 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT3O75175 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.15■□□□□ 0.5
CNOT3O75175 FAM87A-204ENST00000613235 858 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms