Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.31■□□□□ 0.04
SSSCA1O60232 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSSCA1O60232 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSSCA1O60232 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSSCA1O60232 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SSSCA1O60232 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSSCA1O60232 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SSSCA1O60232 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSSCA1O60232 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSSCA1O60232 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSSCA1O60232 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SSSCA1O60232 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.3■□□□□ 0.04
SSSCA1O60232 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SSSCA1O60232 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SSSCA1O60232 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.3■□□□□ 0.04
SSSCA1O60232 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.3■□□□□ 0.04
SSSCA1O60232 AC016769.1-201ENST00000409132 1010 ntBASIC15.3■□□□□ 0.04
SSSCA1O60232 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.3■□□□□ 0.04
SSSCA1O60232 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.3■□□□□ 0.04
SSSCA1O60232 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.3■□□□□ 0.04
SSSCA1O60232 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.3■□□□□ 0.04
SSSCA1O60232 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.3■□□□□ 0.04
SSSCA1O60232 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.3■□□□□ 0.04
SSSCA1O60232 AC005181.1-201ENST00000604782 1256 ntBASIC15.3■□□□□ 0.04
SSSCA1O60232 AC011767.1-201ENST00000617410 1153 ntBASIC15.3■□□□□ 0.04
SSSCA1O60232 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
SSSCA1O60232 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSSCA1O60232 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.29■□□□□ 0.04
SSSCA1O60232 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SSSCA1O60232 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.29■□□□□ 0.04
SSSCA1O60232 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.29■□□□□ 0.04
SSSCA1O60232 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.29■□□□□ 0.04
SSSCA1O60232 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SSSCA1O60232 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.29■□□□□ 0.04
SSSCA1O60232 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
SSSCA1O60232 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SSSCA1O60232 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 AC134043.2-201ENST00000624206 2238 ntBASIC15.29■□□□□ 0.04
SSSCA1O60232 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.29■□□□□ 0.04
SSSCA1O60232 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.29■□□□□ 0.04
SSSCA1O60232 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.29■□□□□ 0.04
SSSCA1O60232 GNAS-203ENST00000306120 1878 ntBASIC15.29■□□□□ 0.04
SSSCA1O60232 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSSCA1O60232 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SSSCA1O60232 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SSSCA1O60232 CROCCP1-201ENST00000426910 5675 ntBASIC15.28■□□□□ 0.04
SSSCA1O60232 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSSCA1O60232 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SSSCA1O60232 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSSCA1O60232 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSSCA1O60232 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSSCA1O60232 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SSSCA1O60232 LINC00896-202ENST00000609602 2128 ntBASIC15.28■□□□□ 0.04
SSSCA1O60232 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSSCA1O60232 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSSCA1O60232 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSSCA1O60232 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms