Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LSM5Q9Y4Y9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.58■□□□□ 0.89
LSM5Q9Y4Y9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSM5Q9Y4Y9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LSM5Q9Y4Y9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSM5Q9Y4Y9 AL133380.1-201ENST00000506013 324 ntBASIC20.58■□□□□ 0.89
LSM5Q9Y4Y9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LSM5Q9Y4Y9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSM5Q9Y4Y9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSM5Q9Y4Y9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM5Q9Y4Y9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.55■□□□□ 0.88
LSM5Q9Y4Y9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LSM5Q9Y4Y9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM5Q9Y4Y9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM5Q9Y4Y9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM5Q9Y4Y9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM5Q9Y4Y9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.54■□□□□ 0.88
LSM5Q9Y4Y9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM5Q9Y4Y9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM5Q9Y4Y9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM5Q9Y4Y9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSM5Q9Y4Y9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM5Q9Y4Y9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSM5Q9Y4Y9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSM5Q9Y4Y9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LSM5Q9Y4Y9 AP002414.2-202ENST00000590929 1450 ntBASIC20.53■□□□□ 0.88
LSM5Q9Y4Y9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LSM5Q9Y4Y9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSM5Q9Y4Y9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LSM5Q9Y4Y9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LSM5Q9Y4Y9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LSM5Q9Y4Y9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
LSM5Q9Y4Y9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.51■□□□□ 0.87
LSM5Q9Y4Y9 AC093323.1-202ENST00000635031 2045 ntBASIC20.51■□□□□ 0.87
LSM5Q9Y4Y9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSM5Q9Y4Y9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LSM5Q9Y4Y9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM5Q9Y4Y9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.5■□□□□ 0.87
LSM5Q9Y4Y9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM5Q9Y4Y9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM5Q9Y4Y9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.49■□□□□ 0.87
LSM5Q9Y4Y9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.49■□□□□ 0.87
LSM5Q9Y4Y9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LSM5Q9Y4Y9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM5Q9Y4Y9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM5Q9Y4Y9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM5Q9Y4Y9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSM5Q9Y4Y9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LSM5Q9Y4Y9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM5Q9Y4Y9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.48■□□□□ 0.87
LSM5Q9Y4Y9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM5Q9Y4Y9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM5Q9Y4Y9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM5Q9Y4Y9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM5Q9Y4Y9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.47■□□□□ 0.87
LSM5Q9Y4Y9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM5Q9Y4Y9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LSM5Q9Y4Y9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.47■□□□□ 0.87
LSM5Q9Y4Y9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM5Q9Y4Y9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 AP002365.1-201ENST00000603448 772 ntBASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM5Q9Y4Y9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LSM5Q9Y4Y9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.45■□□□□ 0.86
LSM5Q9Y4Y9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LSM5Q9Y4Y9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
LSM5Q9Y4Y9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM5Q9Y4Y9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.44■□□□□ 0.86
LSM5Q9Y4Y9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.44■□□□□ 0.86
LSM5Q9Y4Y9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LSM5Q9Y4Y9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM5Q9Y4Y9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.44■□□□□ 0.86
LSM5Q9Y4Y9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM5Q9Y4Y9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSM5Q9Y4Y9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
LSM5Q9Y4Y9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM5Q9Y4Y9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM5Q9Y4Y9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSM5Q9Y4Y9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LSM5Q9Y4Y9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM5Q9Y4Y9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.42■□□□□ 0.86
LSM5Q9Y4Y9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM5Q9Y4Y9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM5Q9Y4Y9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM5Q9Y4Y9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM5Q9Y4Y9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM5Q9Y4Y9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms