Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
SPG7Q9UQ90 AL157400.5-201ENST00000507624 621 ntBASIC33.33■■■□□ 2.93
SPG7Q9UQ90 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC33.33■■■□□ 2.93
SPG7Q9UQ90 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
SPG7Q9UQ90 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC33.32■■■□□ 2.92
SPG7Q9UQ90 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC33.32■■■□□ 2.92
SPG7Q9UQ90 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
SPG7Q9UQ90 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC33.3■■■□□ 2.92
SPG7Q9UQ90 TSPY13P-201ENST00000338964 914 ntBASIC33.3■■■□□ 2.92
SPG7Q9UQ90 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC33.3■■■□□ 2.92
SPG7Q9UQ90 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
SPG7Q9UQ90 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 AC004987.1-201ENST00000428627 508 ntBASIC33.29■■■□□ 2.92
SPG7Q9UQ90 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 AC100797.4-201ENST00000631653 1827 ntBASIC33.29■■■□□ 2.92
SPG7Q9UQ90 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
SPG7Q9UQ90 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
SPG7Q9UQ90 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SPG7Q9UQ90 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
SPG7Q9UQ90 ATP5G2P3-201ENST00000429083 425 ntBASIC33.27■■■□□ 2.92
SPG7Q9UQ90 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
SPG7Q9UQ90 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
SPG7Q9UQ90 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SPG7Q9UQ90 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC33.26■■■□□ 2.91
SPG7Q9UQ90 GFER-205ENST00000569451 517 ntTSL 5 BASIC33.26■■■□□ 2.91
SPG7Q9UQ90 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
SPG7Q9UQ90 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC33.25■■■□□ 2.91
SPG7Q9UQ90 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SPG7Q9UQ90 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
SPG7Q9UQ90 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC33.22■■■□□ 2.91
SPG7Q9UQ90 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SPG7Q9UQ90 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 AC007029.1-201ENST00000604183 313 ntBASIC33.21■■■□□ 2.91
SPG7Q9UQ90 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
SPG7Q9UQ90 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC33.2■■■□□ 2.91
SPG7Q9UQ90 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SPG7Q9UQ90 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 REST-210ENST00000638187 1334 ntTSL 5 BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 GUK1-208ENST00000366728 842 ntTSL 2 BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
SPG7Q9UQ90 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 AL359258.2-201ENST00000564063 1566 ntBASIC33.14■■■□□ 2.9
SPG7Q9UQ90 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC33.12■■■□□ 2.89
SPG7Q9UQ90 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SPG7Q9UQ90 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
SPG7Q9UQ90 SMPD5-203ENST00000639008 1464 ntBASIC33.12■■■□□ 2.89
SPG7Q9UQ90 ST7-205ENST00000393446 2114 ntTSL 5 BASIC33.11■■■□□ 2.89
SPG7Q9UQ90 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SPG7Q9UQ90 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SPG7Q9UQ90 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 AC009831.1-201ENST00000580420 1582 ntBASIC33.09■■■□□ 2.89
SPG7Q9UQ90 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
SPG7Q9UQ90 AC133552.2-201ENST00000619106 1032 ntBASIC33.09■■■□□ 2.89
SPG7Q9UQ90 AC129492.7-201ENST00000622992 756 ntBASIC33.09■■■□□ 2.89
SPG7Q9UQ90 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SPG7Q9UQ90 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SPG7Q9UQ90 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SPG7Q9UQ90 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SPG7Q9UQ90 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SPG7Q9UQ90 AL592293.1-201ENST00000502889 1188 ntBASIC33.07■■■□□ 2.88
SPG7Q9UQ90 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms