Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
UBQLN2Q9UHD9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN2Q9UHD9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN2Q9UHD9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN2Q9UHD9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN2Q9UHD9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
UBQLN2Q9UHD9 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.05■□□□□ 0.96
UBQLN2Q9UHD9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
UBQLN2Q9UHD9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN2Q9UHD9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN2Q9UHD9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN2Q9UHD9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN2Q9UHD9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN2Q9UHD9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN2Q9UHD9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN2Q9UHD9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN2Q9UHD9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN2Q9UHD9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN2Q9UHD9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.03■□□□□ 0.96
UBQLN2Q9UHD9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN2Q9UHD9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN2Q9UHD9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN2Q9UHD9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN2Q9UHD9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.02■□□□□ 0.96
UBQLN2Q9UHD9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.02■□□□□ 0.96
UBQLN2Q9UHD9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN2Q9UHD9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN2Q9UHD9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN2Q9UHD9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN2Q9UHD9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UBQLN2Q9UHD9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UBQLN2Q9UHD9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN2Q9UHD9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN2Q9UHD9 AC012676.1-201ENST00000574705 1949 ntBASIC21■□□□□ 0.95
UBQLN2Q9UHD9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21■□□□□ 0.95
UBQLN2Q9UHD9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBQLN2Q9UHD9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN2Q9UHD9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN2Q9UHD9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN2Q9UHD9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN2Q9UHD9 LINC00543-201ENST00000567234 1845 ntBASIC20.99■□□□□ 0.95
UBQLN2Q9UHD9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN2Q9UHD9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN2Q9UHD9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.98■□□□□ 0.95
UBQLN2Q9UHD9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN2Q9UHD9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN2Q9UHD9 LINC01003-201ENST00000564834 1764 ntBASIC20.97■□□□□ 0.95
UBQLN2Q9UHD9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN2Q9UHD9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN2Q9UHD9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
UBQLN2Q9UHD9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN2Q9UHD9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
UBQLN2Q9UHD9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN2Q9UHD9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.96■□□□□ 0.95
UBQLN2Q9UHD9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN2Q9UHD9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN2Q9UHD9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN2Q9UHD9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN2Q9UHD9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN2Q9UHD9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN2Q9UHD9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN2Q9UHD9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN2Q9UHD9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN2Q9UHD9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
UBQLN2Q9UHD9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.94■□□□□ 0.94
UBQLN2Q9UHD9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN2Q9UHD9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.94■□□□□ 0.94
UBQLN2Q9UHD9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN2Q9UHD9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN2Q9UHD9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN2Q9UHD9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN2Q9UHD9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN2Q9UHD9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN2Q9UHD9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN2Q9UHD9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN2Q9UHD9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.91■□□□□ 0.94
UBQLN2Q9UHD9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN2Q9UHD9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.91■□□□□ 0.94
UBQLN2Q9UHD9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.91■□□□□ 0.94
UBQLN2Q9UHD9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN2Q9UHD9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN2Q9UHD9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN2Q9UHD9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN2Q9UHD9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.89■□□□□ 0.94
UBQLN2Q9UHD9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
UBQLN2Q9UHD9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.89■□□□□ 0.93
UBQLN2Q9UHD9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN2Q9UHD9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN2Q9UHD9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN2Q9UHD9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
UBQLN2Q9UHD9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN2Q9UHD9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.88■□□□□ 0.93
UBQLN2Q9UHD9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms