Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP4-3Q9BYR4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
KRTAP4-3Q9BYR4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 AC060814.1-201ENST00000554326 538 ntBASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP4-3Q9BYR4 RNF126P1-201ENST00000567452 1320 ntBASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 AC008813.1-201ENST00000536597 885 ntBASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
KRTAP4-3Q9BYR4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 AC148477.6-201ENST00000623746 465 ntBASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP4-3Q9BYR4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 ABHD17AP5-201ENST00000580133 923 ntBASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 U85056.1-201ENST00000616429 682 ntBASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 AP004833.2-201ENST00000532228 1454 ntBASIC8.57□□□□□ -1.04
KRTAP4-3Q9BYR4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
KRTAP4-3Q9BYR4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms