Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A7Q99884 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A7Q99884 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SLC6A7Q99884 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC6A7Q99884 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC6A7Q99884 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A7Q99884 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC6A7Q99884 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A7Q99884 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC6A7Q99884 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A7Q99884 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC6A7Q99884 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC6A7Q99884 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A7Q99884 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A7Q99884 AL449106.1-201ENST00000608517 1980 ntBASIC21.63■■□□□ 1.05
SLC6A7Q99884 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A7Q99884 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A7Q99884 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC6A7Q99884 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A7Q99884 LINC01003-201ENST00000564834 1764 ntBASIC21.62■■□□□ 1.05
SLC6A7Q99884 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A7Q99884 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A7Q99884 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A7Q99884 AP004833.2-201ENST00000532228 1454 ntBASIC21.6■■□□□ 1.05
SLC6A7Q99884 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SLC6A7Q99884 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.6■■□□□ 1.05
SLC6A7Q99884 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A7Q99884 MIR639-201ENST00000384974 98 ntBASIC21.59■■□□□ 1.05
SLC6A7Q99884 MIR4449-201ENST00000578365 66 ntBASIC21.59■■□□□ 1.05
SLC6A7Q99884 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A7Q99884 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A7Q99884 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A7Q99884 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC6A7Q99884 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.58■■□□□ 1.05
SLC6A7Q99884 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A7Q99884 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SLC6A7Q99884 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC6A7Q99884 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A7Q99884 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLC6A7Q99884 AC016575.1-201ENST00000607026 382 ntBASIC21.56■■□□□ 1.04
SLC6A7Q99884 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A7Q99884 MIR3648-2-201ENST00000581792 180 ntBASIC21.55■■□□□ 1.04
SLC6A7Q99884 MIR3648-1-201ENST00000615959 180 ntBASIC21.55■■□□□ 1.04
SLC6A7Q99884 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A7Q99884 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
SLC6A7Q99884 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A7Q99884 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC6A7Q99884 DUX4L11-201ENST00000611504 1267 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A7Q99884 DUX4L12-201ENST00000614593 1267 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 LINC01971-201ENST00000617888 1048 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 DUX4L14-201ENST00000621227 1267 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SLC6A7Q99884 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SLC6A7Q99884 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms