Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
CMKLR1Q99788 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CMKLR1Q99788 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.2■■□□□ 1.46
CMKLR1Q99788 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CMKLR1Q99788 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CMKLR1Q99788 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.19■■□□□ 1.46
CMKLR1Q99788 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CMKLR1Q99788 AP004833.2-201ENST00000532228 1454 ntBASIC24.19■■□□□ 1.46
CMKLR1Q99788 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CMKLR1Q99788 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CMKLR1Q99788 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CMKLR1Q99788 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.16■■□□□ 1.46
CMKLR1Q99788 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CMKLR1Q99788 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CMKLR1Q99788 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CMKLR1Q99788 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CMKLR1Q99788 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.15■■□□□ 1.46
CMKLR1Q99788 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CMKLR1Q99788 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CMKLR1Q99788 TSPY13P-201ENST00000338964 914 ntBASIC24.14■■□□□ 1.45
CMKLR1Q99788 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CMKLR1Q99788 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CMKLR1Q99788 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CMKLR1Q99788 ST7-AS1-201ENST00000456775 1889 ntBASIC24.13■■□□□ 1.45
CMKLR1Q99788 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.13■■□□□ 1.45
CMKLR1Q99788 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.12■■□□□ 1.45
CMKLR1Q99788 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CMKLR1Q99788 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CMKLR1Q99788 KRT18P60-201ENST00000312876 1297 ntBASIC24.12■■□□□ 1.45
CMKLR1Q99788 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.12■■□□□ 1.45
CMKLR1Q99788 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CMKLR1Q99788 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.12■■□□□ 1.45
CMKLR1Q99788 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CMKLR1Q99788 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.11■■□□□ 1.45
CMKLR1Q99788 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.11■■□□□ 1.45
CMKLR1Q99788 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.1■■□□□ 1.45
CMKLR1Q99788 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CMKLR1Q99788 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CMKLR1Q99788 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.1■■□□□ 1.45
CMKLR1Q99788 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.1■■□□□ 1.45
CMKLR1Q99788 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.09■■□□□ 1.45
CMKLR1Q99788 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CMKLR1Q99788 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CMKLR1Q99788 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CMKLR1Q99788 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CMKLR1Q99788 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CMKLR1Q99788 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CMKLR1Q99788 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CMKLR1Q99788 AC004987.1-201ENST00000428627 508 ntBASIC24.08■■□□□ 1.45
CMKLR1Q99788 ATP5G2P3-201ENST00000429083 425 ntBASIC24.08■■□□□ 1.45
CMKLR1Q99788 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.07■■□□□ 1.44
CMKLR1Q99788 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CMKLR1Q99788 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CMKLR1Q99788 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CMKLR1Q99788 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.06■■□□□ 1.44
CMKLR1Q99788 AL157400.5-201ENST00000507624 621 ntBASIC24.06■■□□□ 1.44
CMKLR1Q99788 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CMKLR1Q99788 AC100797.4-201ENST00000631653 1827 ntBASIC24.05■■□□□ 1.44
CMKLR1Q99788 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.05■■□□□ 1.44
CMKLR1Q99788 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CMKLR1Q99788 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CMKLR1Q99788 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.04■■□□□ 1.44
CMKLR1Q99788 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CMKLR1Q99788 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CMKLR1Q99788 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.04■■□□□ 1.44
CMKLR1Q99788 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.04■■□□□ 1.44
CMKLR1Q99788 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.04■■□□□ 1.44
CMKLR1Q99788 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CMKLR1Q99788 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CMKLR1Q99788 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CMKLR1Q99788 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.03■■□□□ 1.44
CMKLR1Q99788 AC007029.1-201ENST00000604183 313 ntBASIC24.03■■□□□ 1.44
CMKLR1Q99788 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CMKLR1Q99788 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.02■■□□□ 1.44
CMKLR1Q99788 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CMKLR1Q99788 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.02■■□□□ 1.44
CMKLR1Q99788 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CMKLR1Q99788 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.01■■□□□ 1.43
CMKLR1Q99788 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CMKLR1Q99788 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CMKLR1Q99788 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.01■■□□□ 1.43
CMKLR1Q99788 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CMKLR1Q99788 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24■■□□□ 1.43
CMKLR1Q99788 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CMKLR1Q99788 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24■■□□□ 1.43
CMKLR1Q99788 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24■■□□□ 1.43
CMKLR1Q99788 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24■■□□□ 1.43
CMKLR1Q99788 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CMKLR1Q99788 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24■■□□□ 1.43
CMKLR1Q99788 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CMKLR1Q99788 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CMKLR1Q99788 AL359258.2-201ENST00000564063 1566 ntBASIC23.99■■□□□ 1.43
CMKLR1Q99788 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.99■■□□□ 1.43
CMKLR1Q99788 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CMKLR1Q99788 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CMKLR1Q99788 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.99■■□□□ 1.43
CMKLR1Q99788 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CMKLR1Q99788 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CMKLR1Q99788 SMPD5-203ENST00000639008 1464 ntBASIC23.99■■□□□ 1.43
CMKLR1Q99788 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms