Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF2Q99496 AC108673.1-201ENST00000510422 1159 ntBASIC19.77■□□□□ 0.76
RNF2Q99496 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF2Q99496 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF2Q99496 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF2Q99496 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF2Q99496 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF2Q99496 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF2Q99496 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF2Q99496 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF2Q99496 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF2Q99496 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF2Q99496 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF2Q99496 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF2Q99496 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF2Q99496 AP002414.2-202ENST00000590929 1450 ntBASIC19.74■□□□□ 0.75
RNF2Q99496 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF2Q99496 MIR6090-201ENST00000622481 60 ntBASIC19.74■□□□□ 0.75
RNF2Q99496 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF2Q99496 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RNF2Q99496 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF2Q99496 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF2Q99496 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF2Q99496 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF2Q99496 AC044849.2-201ENST00000606596 710 ntBASIC19.73■□□□□ 0.75
RNF2Q99496 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RNF2Q99496 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF2Q99496 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF2Q99496 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RNF2Q99496 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF2Q99496 RPS2P35-201ENST00000443417 897 ntBASIC19.72■□□□□ 0.75
RNF2Q99496 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.72■□□□□ 0.75
RNF2Q99496 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF2Q99496 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF2Q99496 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF2Q99496 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF2Q99496 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF2Q99496 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF2Q99496 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF2Q99496 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF2Q99496 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF2Q99496 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF2Q99496 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF2Q99496 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF2Q99496 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF2Q99496 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF2Q99496 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF2Q99496 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF2Q99496 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF2Q99496 AC100797.4-201ENST00000631653 1827 ntBASIC19.69■□□□□ 0.74
RNF2Q99496 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF2Q99496 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF2Q99496 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF2Q99496 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF2Q99496 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF2Q99496 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF2Q99496 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF2Q99496 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF2Q99496 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF2Q99496 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF2Q99496 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RNF2Q99496 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF2Q99496 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF2Q99496 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF2Q99496 AL449106.1-201ENST00000608517 1980 ntBASIC19.68■□□□□ 0.74
RNF2Q99496 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF2Q99496 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF2Q99496 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF2Q99496 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF2Q99496 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF2Q99496 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF2Q99496 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF2Q99496 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF2Q99496 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF2Q99496 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF2Q99496 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF2Q99496 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF2Q99496 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF2Q99496 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF2Q99496 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF2Q99496 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF2Q99496 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF2Q99496 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF2Q99496 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF2Q99496 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF2Q99496 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF2Q99496 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF2Q99496 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF2Q99496 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF2Q99496 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF2Q99496 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF2Q99496 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RNF2Q99496 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms