Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.19■□□□□ 0.98
TIMD4Q96H15 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TIMD4Q96H15 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.18■□□□□ 0.98
TIMD4Q96H15 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.18■□□□□ 0.98
TIMD4Q96H15 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.18■□□□□ 0.98
TIMD4Q96H15 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.17■□□□□ 0.98
TIMD4Q96H15 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TIMD4Q96H15 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TIMD4Q96H15 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TIMD4Q96H15 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TIMD4Q96H15 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMD4Q96H15 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TIMD4Q96H15 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TIMD4Q96H15 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMD4Q96H15 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
TIMD4Q96H15 RNF126P1-201ENST00000567452 1320 ntBASIC21.13■□□□□ 0.97
TIMD4Q96H15 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TIMD4Q96H15 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMD4Q96H15 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TIMD4Q96H15 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.12■□□□□ 0.97
TIMD4Q96H15 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TIMD4Q96H15 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMD4Q96H15 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TIMD4Q96H15 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.12■□□□□ 0.97
TIMD4Q96H15 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMD4Q96H15 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TIMD4Q96H15 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.11■□□□□ 0.97
TIMD4Q96H15 AP002414.2-202ENST00000590929 1450 ntBASIC21.11■□□□□ 0.97
TIMD4Q96H15 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMD4Q96H15 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMD4Q96H15 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.11■□□□□ 0.97
TIMD4Q96H15 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TIMD4Q96H15 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMD4Q96H15 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMD4Q96H15 RARRES2P2-201ENST00000394842 485 ntBASIC21.1■□□□□ 0.97
TIMD4Q96H15 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMD4Q96H15 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMD4Q96H15 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TIMD4Q96H15 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.09■□□□□ 0.97
TIMD4Q96H15 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMD4Q96H15 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMD4Q96H15 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMD4Q96H15 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TIMD4Q96H15 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TIMD4Q96H15 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMD4Q96H15 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.07■□□□□ 0.96
TIMD4Q96H15 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMD4Q96H15 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TIMD4Q96H15 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMD4Q96H15 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TIMD4Q96H15 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TIMD4Q96H15 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMD4Q96H15 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.06■□□□□ 0.96
TIMD4Q96H15 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMD4Q96H15 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMD4Q96H15 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TIMD4Q96H15 AC060814.1-201ENST00000554326 538 ntBASIC21.05■□□□□ 0.96
TIMD4Q96H15 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.05■□□□□ 0.96
TIMD4Q96H15 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.04■□□□□ 0.96
TIMD4Q96H15 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMD4Q96H15 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMD4Q96H15 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMD4Q96H15 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.03■□□□□ 0.96
TIMD4Q96H15 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.03■□□□□ 0.96
TIMD4Q96H15 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMD4Q96H15 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TIMD4Q96H15 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TIMD4Q96H15 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TIMD4Q96H15 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMD4Q96H15 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TIMD4Q96H15 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.02■□□□□ 0.96
TIMD4Q96H15 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMD4Q96H15 ABHD17AP5-201ENST00000580133 923 ntBASIC21.01■□□□□ 0.95
TIMD4Q96H15 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TIMD4Q96H15 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
TIMD4Q96H15 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMD4Q96H15 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMD4Q96H15 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMD4Q96H15 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMD4Q96H15 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMD4Q96H15 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TIMD4Q96H15 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMD4Q96H15 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TIMD4Q96H15 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.99■□□□□ 0.95
TIMD4Q96H15 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMD4Q96H15 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMD4Q96H15 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TIMD4Q96H15 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMD4Q96H15 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMD4Q96H15 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMD4Q96H15 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMD4Q96H15 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TIMD4Q96H15 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms