Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF139Q8WU17 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.47■■□□□ 1.83
RNF139Q8WU17 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RNF139Q8WU17 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RNF139Q8WU17 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.46■■□□□ 1.83
RNF139Q8WU17 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.46■■□□□ 1.83
RNF139Q8WU17 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
RNF139Q8WU17 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF139Q8WU17 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF139Q8WU17 AC142086.6-201ENST00000621154 1765 ntBASIC26.45■■□□□ 1.82
RNF139Q8WU17 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF139Q8WU17 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.44■■□□□ 1.82
RNF139Q8WU17 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RNF139Q8WU17 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
RNF139Q8WU17 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.43■■□□□ 1.82
RNF139Q8WU17 AP002414.2-202ENST00000590929 1450 ntBASIC26.42■■□□□ 1.82
RNF139Q8WU17 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF139Q8WU17 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.41■■□□□ 1.82
RNF139Q8WU17 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
RNF139Q8WU17 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF139Q8WU17 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF139Q8WU17 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.4■■□□□ 1.82
RNF139Q8WU17 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
RNF139Q8WU17 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
RNF139Q8WU17 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
RNF139Q8WU17 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.39■■□□□ 1.82
RNF139Q8WU17 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.39■■□□□ 1.82
RNF139Q8WU17 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.39■■□□□ 1.81
RNF139Q8WU17 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
RNF139Q8WU17 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF139Q8WU17 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RNF139Q8WU17 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF139Q8WU17 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.38■■□□□ 1.81
RNF139Q8WU17 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RNF139Q8WU17 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
RNF139Q8WU17 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.38■■□□□ 1.81
RNF139Q8WU17 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF139Q8WU17 AC148477.6-201ENST00000623746 465 ntBASIC26.37■■□□□ 1.81
RNF139Q8WU17 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF139Q8WU17 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF139Q8WU17 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF139Q8WU17 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF139Q8WU17 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF139Q8WU17 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF139Q8WU17 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RNF139Q8WU17 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF139Q8WU17 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF139Q8WU17 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RNF139Q8WU17 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RNF139Q8WU17 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF139Q8WU17 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF139Q8WU17 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
RNF139Q8WU17 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RNF139Q8WU17 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RNF139Q8WU17 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RNF139Q8WU17 MIR219A2-201ENST00000608502 1504 ntBASIC26.33■■□□□ 1.81
RNF139Q8WU17 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.32■■□□□ 1.8
RNF139Q8WU17 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF139Q8WU17 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.32■■□□□ 1.8
RNF139Q8WU17 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.31■■□□□ 1.8
RNF139Q8WU17 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.31■■□□□ 1.8
RNF139Q8WU17 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
RNF139Q8WU17 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF139Q8WU17 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.3■■□□□ 1.8
RNF139Q8WU17 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF139Q8WU17 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF139Q8WU17 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF139Q8WU17 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.29■■□□□ 1.8
RNF139Q8WU17 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.28■■□□□ 1.8
RNF139Q8WU17 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF139Q8WU17 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.28■■□□□ 1.8
RNF139Q8WU17 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RNF139Q8WU17 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF139Q8WU17 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF139Q8WU17 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF139Q8WU17 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
RNF139Q8WU17 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.27■■□□□ 1.8
RNF139Q8WU17 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.27■■□□□ 1.8
RNF139Q8WU17 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF139Q8WU17 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF139Q8WU17 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.27■■□□□ 1.8
RNF139Q8WU17 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
RNF139Q8WU17 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF139Q8WU17 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RNF139Q8WU17 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF139Q8WU17 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.25■■□□□ 1.79
RNF139Q8WU17 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RNF139Q8WU17 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms