Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC25Q86WR0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC25Q86WR0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC25Q86WR0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CCDC25Q86WR0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
CCDC25Q86WR0 AC091060.1-201ENST00000623524 1766 ntBASIC25.77■■□□□ 1.72
CCDC25Q86WR0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC25Q86WR0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC25Q86WR0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
CCDC25Q86WR0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC25Q86WR0 MIR762-201ENST00000390236 83 ntBASIC25.76■■□□□ 1.71
CCDC25Q86WR0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC25Q86WR0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC25Q86WR0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.74■■□□□ 1.71
CCDC25Q86WR0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC25Q86WR0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCDC25Q86WR0 AC018358.1-201ENST00000631079 1402 ntBASIC25.73■■□□□ 1.71
CCDC25Q86WR0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.73■■□□□ 1.71
CCDC25Q86WR0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCDC25Q86WR0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC25Q86WR0 AC135983.2-203ENST00000454486 1613 ntBASIC25.72■■□□□ 1.71
CCDC25Q86WR0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CCDC25Q86WR0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.71■■□□□ 1.71
CCDC25Q86WR0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.71■■□□□ 1.71
CCDC25Q86WR0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CCDC25Q86WR0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
CCDC25Q86WR0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CCDC25Q86WR0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC25Q86WR0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC25Q86WR0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CCDC25Q86WR0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.7■■□□□ 1.7
CCDC25Q86WR0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CCDC25Q86WR0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCDC25Q86WR0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC25Q86WR0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CCDC25Q86WR0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CCDC25Q86WR0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.69■■□□□ 1.7
CCDC25Q86WR0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC25Q86WR0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC25Q86WR0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CCDC25Q86WR0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC25Q86WR0 WHAMMP2-203ENST00000563942 1603 ntBASIC25.68■■□□□ 1.7
CCDC25Q86WR0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC25Q86WR0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC25Q86WR0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC25Q86WR0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC25Q86WR0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CCDC25Q86WR0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC25Q86WR0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC25Q86WR0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC25Q86WR0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC25Q86WR0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC25Q86WR0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.65■■□□□ 1.7
CCDC25Q86WR0 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.65■■□□□ 1.7
CCDC25Q86WR0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC25Q86WR0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CCDC25Q86WR0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC25Q86WR0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC25Q86WR0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.63■■□□□ 1.69
CCDC25Q86WR0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CCDC25Q86WR0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC25Q86WR0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC25Q86WR0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC25Q86WR0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC25Q86WR0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC25Q86WR0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC25Q86WR0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC25Q86WR0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CCDC25Q86WR0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CCDC25Q86WR0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.61■■□□□ 1.69
CCDC25Q86WR0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.61■■□□□ 1.69
CCDC25Q86WR0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.61■■□□□ 1.69
CCDC25Q86WR0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.6■■□□□ 1.69
CCDC25Q86WR0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC25Q86WR0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC25Q86WR0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.6■■□□□ 1.69
CCDC25Q86WR0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
CCDC25Q86WR0 AC145676.1-201ENST00000514988 2004 ntBASIC25.59■■□□□ 1.69
CCDC25Q86WR0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC25Q86WR0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC25Q86WR0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC25Q86WR0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CCDC25Q86WR0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC25Q86WR0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC25Q86WR0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC25Q86WR0 AC005559.1-201ENST00000589661 871 ntBASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms