Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MIR639-201ENST00000384974 98 ntBASIC28.69■■■□□ 2.18
PPP4R3AQ6IN85 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
PPP4R3AQ6IN85 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
PPP4R3AQ6IN85 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R3AQ6IN85 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
PPP4R3AQ6IN85 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PPP4R3AQ6IN85 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PPP4R3AQ6IN85 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PPP4R3AQ6IN85 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PPP4R3AQ6IN85 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.67■■■□□ 2.18
PPP4R3AQ6IN85 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
PPP4R3AQ6IN85 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R3AQ6IN85 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.67■■■□□ 2.18
PPP4R3AQ6IN85 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.67■■■□□ 2.18
PPP4R3AQ6IN85 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R3AQ6IN85 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.66■■■□□ 2.18
PPP4R3AQ6IN85 AC018358.1-201ENST00000631079 1402 ntBASIC28.66■■■□□ 2.18
PPP4R3AQ6IN85 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
PPP4R3AQ6IN85 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.66■■■□□ 2.18
PPP4R3AQ6IN85 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.64■■■□□ 2.18
PPP4R3AQ6IN85 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.63■■■□□ 2.17
PPP4R3AQ6IN85 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PPP4R3AQ6IN85 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
PPP4R3AQ6IN85 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4R3AQ6IN85 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.62■■■□□ 2.17
PPP4R3AQ6IN85 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
PPP4R3AQ6IN85 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
PPP4R3AQ6IN85 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
PPP4R3AQ6IN85 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PPP4R3AQ6IN85 HLA-V-202ENST00000446817 847 ntBASIC28.61■■■□□ 2.17
PPP4R3AQ6IN85 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.61■■■□□ 2.17
PPP4R3AQ6IN85 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
PPP4R3AQ6IN85 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PPP4R3AQ6IN85 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PPP4R3AQ6IN85 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.6■■■□□ 2.17
PPP4R3AQ6IN85 AC148477.6-201ENST00000623746 465 ntBASIC28.59■■■□□ 2.17
PPP4R3AQ6IN85 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
PPP4R3AQ6IN85 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PPP4R3AQ6IN85 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.58■■■□□ 2.17
PPP4R3AQ6IN85 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
PPP4R3AQ6IN85 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4R3AQ6IN85 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.57■■■□□ 2.16
PPP4R3AQ6IN85 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4R3AQ6IN85 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4R3AQ6IN85 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PPP4R3AQ6IN85 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.56■■■□□ 2.16
PPP4R3AQ6IN85 LINC01003-201ENST00000564834 1764 ntBASIC28.56■■■□□ 2.16
PPP4R3AQ6IN85 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
PPP4R3AQ6IN85 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.55■■■□□ 2.16
PPP4R3AQ6IN85 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.54■■■□□ 2.16
PPP4R3AQ6IN85 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
PPP4R3AQ6IN85 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4R3AQ6IN85 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PPP4R3AQ6IN85 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PPP4R3AQ6IN85 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
PPP4R3AQ6IN85 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PPP4R3AQ6IN85 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PPP4R3AQ6IN85 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
PPP4R3AQ6IN85 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PPP4R3AQ6IN85 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
PPP4R3AQ6IN85 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.52■■■□□ 2.16
PPP4R3AQ6IN85 MIR4449-201ENST00000578365 66 ntBASIC28.52■■■□□ 2.16
PPP4R3AQ6IN85 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PPP4R3AQ6IN85 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PPP4R3AQ6IN85 BX255925.1-201ENST00000566954 1854 ntBASIC28.51■■■□□ 2.15
PPP4R3AQ6IN85 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4R3AQ6IN85 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
PPP4R3AQ6IN85 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PPP4R3AQ6IN85 MIR219A2-201ENST00000608502 1504 ntBASIC28.5■■■□□ 2.15
PPP4R3AQ6IN85 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PPP4R3AQ6IN85 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.5■■■□□ 2.15
PPP4R3AQ6IN85 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PPP4R3AQ6IN85 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.49■■■□□ 2.15
PPP4R3AQ6IN85 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4R3AQ6IN85 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4R3AQ6IN85 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4R3AQ6IN85 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPP4R3AQ6IN85 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPP4R3AQ6IN85 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPP4R3AQ6IN85 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPP4R3AQ6IN85 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.47■■■□□ 2.15
PPP4R3AQ6IN85 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
PPP4R3AQ6IN85 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PPP4R3AQ6IN85 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PPP4R3AQ6IN85 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.45■■■□□ 2.15
PPP4R3AQ6IN85 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PPP4R3AQ6IN85 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PPP4R3AQ6IN85 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
PPP4R3AQ6IN85 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PPP4R3AQ6IN85 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.43■■■□□ 2.14
PPP4R3AQ6IN85 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.42■■■□□ 2.14
PPP4R3AQ6IN85 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PPP4R3AQ6IN85 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
PPP4R3AQ6IN85 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PPP4R3AQ6IN85 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PPP4R3AQ6IN85 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PPP4R3AQ6IN85 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
PPP4R3AQ6IN85 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.4■■■□□ 2.14
PPP4R3AQ6IN85 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PPP4R3AQ6IN85 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms