Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.58■■■□□ 2.33
COL13A1Q5TAT6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
COL13A1Q5TAT6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL13A1Q5TAT6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL13A1Q5TAT6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL13A1Q5TAT6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL13A1Q5TAT6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
COL13A1Q5TAT6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
COL13A1Q5TAT6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL13A1Q5TAT6 AC026271.2-201ENST00000428091 497 ntBASIC29.56■■■□□ 2.32
COL13A1Q5TAT6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
COL13A1Q5TAT6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.55■■■□□ 2.32
COL13A1Q5TAT6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.55■■■□□ 2.32
COL13A1Q5TAT6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC29.55■■■□□ 2.32
COL13A1Q5TAT6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL13A1Q5TAT6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.54■■■□□ 2.32
COL13A1Q5TAT6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.54■■■□□ 2.32
COL13A1Q5TAT6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.54■■■□□ 2.32
COL13A1Q5TAT6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC29.53■■■□□ 2.32
COL13A1Q5TAT6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL13A1Q5TAT6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL13A1Q5TAT6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.52■■■□□ 2.32
COL13A1Q5TAT6 SMPD5-203ENST00000639008 1464 ntBASIC29.52■■■□□ 2.32
COL13A1Q5TAT6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
COL13A1Q5TAT6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.51■■■□□ 2.31
COL13A1Q5TAT6 AL157400.5-201ENST00000507624 621 ntBASIC29.51■■■□□ 2.31
COL13A1Q5TAT6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.51■■■□□ 2.31
COL13A1Q5TAT6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
COL13A1Q5TAT6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.5■■■□□ 2.31
COL13A1Q5TAT6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL13A1Q5TAT6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.5■■■□□ 2.31
COL13A1Q5TAT6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC29.5■■■□□ 2.31
COL13A1Q5TAT6 MIR219A2-201ENST00000608502 1504 ntBASIC29.5■■■□□ 2.31
COL13A1Q5TAT6 AC026202.3-201ENST00000600805 1127 ntBASIC29.49■■■□□ 2.31
COL13A1Q5TAT6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL13A1Q5TAT6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
COL13A1Q5TAT6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.47■■■□□ 2.31
COL13A1Q5TAT6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
COL13A1Q5TAT6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.46■■■□□ 2.31
COL13A1Q5TAT6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC29.46■■■□□ 2.31
COL13A1Q5TAT6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
COL13A1Q5TAT6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL13A1Q5TAT6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL13A1Q5TAT6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL13A1Q5TAT6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
COL13A1Q5TAT6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
COL13A1Q5TAT6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.45■■■□□ 2.31
COL13A1Q5TAT6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.45■■■□□ 2.31
COL13A1Q5TAT6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.45■■■□□ 2.31
COL13A1Q5TAT6 ZNRF2P3-201ENST00000424200 374 ntBASIC29.44■■■□□ 2.3
COL13A1Q5TAT6 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.44■■■□□ 2.3
COL13A1Q5TAT6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 AC110285.6-201ENST00000617652 491 ntBASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
COL13A1Q5TAT6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.42■■■□□ 2.3
COL13A1Q5TAT6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.42■■■□□ 2.3
COL13A1Q5TAT6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.41■■■□□ 2.3
COL13A1Q5TAT6 MIR5787-201ENST00000611784 55 ntBASIC29.41■■■□□ 2.3
COL13A1Q5TAT6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.41■■■□□ 2.3
COL13A1Q5TAT6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.41■■■□□ 2.3
COL13A1Q5TAT6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL13A1Q5TAT6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
COL13A1Q5TAT6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL13A1Q5TAT6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL13A1Q5TAT6 Z92544.1-202ENST00000571933 1220 ntBASIC29.39■■■□□ 2.3
COL13A1Q5TAT6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
COL13A1Q5TAT6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.38■■■□□ 2.29
COL13A1Q5TAT6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL13A1Q5TAT6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.37■■■□□ 2.29
COL13A1Q5TAT6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL13A1Q5TAT6 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.37■■■□□ 2.29
COL13A1Q5TAT6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
COL13A1Q5TAT6 AC126177.7-201ENST00000547904 679 ntBASIC29.37■■■□□ 2.29
COL13A1Q5TAT6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
COL13A1Q5TAT6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL13A1Q5TAT6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
COL13A1Q5TAT6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.35■■■□□ 2.29
COL13A1Q5TAT6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.35■■■□□ 2.29
COL13A1Q5TAT6 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.35■■■□□ 2.29
COL13A1Q5TAT6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
COL13A1Q5TAT6 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.35■■■□□ 2.29
COL13A1Q5TAT6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL13A1Q5TAT6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.34■■■□□ 2.29
COL13A1Q5TAT6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
COL13A1Q5TAT6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.33■■■□□ 2.29
COL13A1Q5TAT6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL13A1Q5TAT6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
COL13A1Q5TAT6 AC120057.4-201ENST00000624722 1615 ntBASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms