Protein–RNA interactions for Protein: Q5SZI1

LDLRAD2, Low-density lipoprotein receptor class A domain-containing protein 2, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2Q5SZI1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAD2Q5SZI1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LDLRAD2Q5SZI1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAD2Q5SZI1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAD2Q5SZI1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LDLRAD2Q5SZI1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.51■□□□□ 0.87
LDLRAD2Q5SZI1 MIR4449-201ENST00000578365 66 ntBASIC20.51■□□□□ 0.87
LDLRAD2Q5SZI1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAD2Q5SZI1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAD2Q5SZI1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LDLRAD2Q5SZI1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.5■□□□□ 0.87
LDLRAD2Q5SZI1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LDLRAD2Q5SZI1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDLRAD2Q5SZI1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDLRAD2Q5SZI1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LDLRAD2Q5SZI1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDLRAD2Q5SZI1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LDLRAD2Q5SZI1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.49■□□□□ 0.87
LDLRAD2Q5SZI1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDLRAD2Q5SZI1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.48■□□□□ 0.87
LDLRAD2Q5SZI1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LDLRAD2Q5SZI1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDLRAD2Q5SZI1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
LDLRAD2Q5SZI1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDLRAD2Q5SZI1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LDLRAD2Q5SZI1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
LDLRAD2Q5SZI1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.47■□□□□ 0.87
LDLRAD2Q5SZI1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LDLRAD2Q5SZI1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.47■□□□□ 0.87
LDLRAD2Q5SZI1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD2Q5SZI1 AC008813.1-201ENST00000536597 885 ntBASIC20.46■□□□□ 0.87
LDLRAD2Q5SZI1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD2Q5SZI1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD2Q5SZI1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LDLRAD2Q5SZI1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LDLRAD2Q5SZI1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.44■□□□□ 0.86
LDLRAD2Q5SZI1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LDLRAD2Q5SZI1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.44■□□□□ 0.86
LDLRAD2Q5SZI1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LDLRAD2Q5SZI1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LDLRAD2Q5SZI1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD2Q5SZI1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDLRAD2Q5SZI1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.42■□□□□ 0.86
LDLRAD2Q5SZI1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD2Q5SZI1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LDLRAD2Q5SZI1 MIR219A2-201ENST00000608502 1504 ntBASIC20.41■□□□□ 0.86
LDLRAD2Q5SZI1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.41■□□□□ 0.86
LDLRAD2Q5SZI1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LDLRAD2Q5SZI1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LDLRAD2Q5SZI1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
LDLRAD2Q5SZI1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAD2Q5SZI1 AC148477.6-201ENST00000623746 465 ntBASIC20.4■□□□□ 0.86
LDLRAD2Q5SZI1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LDLRAD2Q5SZI1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD2Q5SZI1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD2Q5SZI1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD2Q5SZI1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD2Q5SZI1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.39■□□□□ 0.85
LDLRAD2Q5SZI1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LDLRAD2Q5SZI1 AC018358.1-201ENST00000631079 1402 ntBASIC20.38■□□□□ 0.85
LDLRAD2Q5SZI1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAD2Q5SZI1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
LDLRAD2Q5SZI1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAD2Q5SZI1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 AC142086.6-201ENST00000621154 1765 ntBASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD2Q5SZI1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
LDLRAD2Q5SZI1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD2Q5SZI1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LDLRAD2Q5SZI1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.36■□□□□ 0.85
LDLRAD2Q5SZI1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.36■□□□□ 0.85
LDLRAD2Q5SZI1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.36■□□□□ 0.85
LDLRAD2Q5SZI1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.36■□□□□ 0.85
LDLRAD2Q5SZI1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms