Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 NFRKB-206ENST00000529319 843 ntTSL 321.32■■□□□ 19e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-211ENST00000532225 938 ntTSL 521.32■■□□□ 19e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-207ENST00000530278 895 ntTSL 320.5■□□□□ 0.879e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC8.93□□□□□ -0.989e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-201ENST00000446488 5093 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.989e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-208ENST00000531318 564 ntTSL 47.49□□□□□ -1.219e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-209ENST00000531755 3066 ntTSL 56.97□□□□□ -1.299e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.339e-10■■■■□ 26.2
SRSF1Q07955 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC6.62□□□□□ -1.359e-10■■■■□ 26.2
SRSF1Q07955 ATP5B-205ENST00000548647 682 ntTSL 515.08■□□□□ 03e-8■■■■□ 26.2
SRSF1Q07955 LUC7L-213ENST00000464711 2134 ntTSL 212.73□□□□□ -0.371e-9■■■■□ 26.2
SRSF1Q07955 LUC7L-220ENST00000495349 1006 ntTSL 211.73□□□□□ -0.531e-9■■■■□ 26.2
SRSF1Q07955 MKLN1-208ENST00000494286 582 ntTSL 417.22■□□□□ 0.351e-7■■■■□ 26.1
SRSF1Q07955 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.15□□□□□ -0.621e-7■■■■□ 26.1
SRSF1Q07955 MKLN1-209ENST00000494785 2386 ntTSL 1 (best)9.57□□□□□ -0.881e-7■■■■□ 26.1
SRSF1Q07955 MKLN1-206ENST00000458153 2448 ntTSL 29.52□□□□□ -0.891e-7■■■■□ 26.1
SRSF1Q07955 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.971e-7■■■■□ 26.1
SRSF1Q07955 CSNK1D-221ENST00000582844 957 ntTSL 520.36■□□□□ 0.857e-7■■■■□ 26.1
SRSF1Q07955 CSNK1D-201ENST00000269361 1088 ntTSL 516.94■□□□□ 0.37e-7■■■■□ 26.1
SRSF1Q07955 CSNK1D-209ENST00000578904 1269 ntTSL 312.24□□□□□ -0.457e-7■■■■□ 26.1
SRSF1Q07955 CSNK1D-207ENST00000578194 567 ntTSL 411.53□□□□□ -0.567e-7■■■■□ 26.1
SRSF1Q07955 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.022e-32■■■■□ 26.1
SRSF1Q07955 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC8.52□□□□□ -1.042e-32■■■■□ 26.1
SRSF1Q07955 SET-205ENST00000409104 962 ntTSL 5 BASIC7.95□□□□□ -1.142e-32■■■■□ 26.1
SRSF1Q07955 SET-202ENST00000372686 1029 ntTSL 23.96□□□□□ -1.782e-32■■■■□ 26.1
SRSF1Q07955 SET-203ENST00000372688 801 ntTSL 2 BASIC2.96□□□□□ -1.942e-32■■■■□ 26.1
SRSF1Q07955 NT5C-202ENST00000577523 776 ntTSL 221.92■■□□□ 1.11e-15■■■■□ 26.1
SRSF1Q07955 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.23■□□□□ 0.351e-15■■■■□ 26.1
SRSF1Q07955 NT5C-208ENST00000580423 450 ntTSL 215.96■□□□□ 0.151e-15■■■■□ 26.1
SRSF1Q07955 NT5C-212ENST00000582744 921 ntTSL 215.73■□□□□ 0.111e-15■■■■□ 26.1
SRSF1Q07955 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.7□□□□□ -0.381e-15■■■■□ 26.1
SRSF1Q07955 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.042e-7■■■■□ 26.1
SRSF1Q07955 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.832e-7■■■■□ 26.1
SRSF1Q07955 NSUN5P2-202ENST00000444583 1180 ntTSL 1 (best)18.75■□□□□ 0.592e-7■■■■□ 26.1
SRSF1Q07955 NOM1-203ENST00000469271 1209 ntTSL 1 (best)18.73■□□□□ 0.592e-7■■■■□ 26.1
SRSF1Q07955 NOM1-208ENST00000489850 559 ntTSL 1 (best)18.73■□□□□ 0.592e-7■■■■□ 26.1
SRSF1Q07955 RCCD1-205ENST00000556333 735 ntTSL 1 (best)18.45■□□□□ 0.542e-7■■■■□ 26.1
SRSF1Q07955 PCNX3-203ENST00000530174 1229 ntTSL 1 (best)17.73■□□□□ 0.432e-7■■■■□ 26.1
SRSF1Q07955 RCCD1-208ENST00000557266 2110 ntTSL 1 (best)17.2■□□□□ 0.342e-7■■■■□ 26.1
SRSF1Q07955 NSUN5P2-203ENST00000457352 1529 ntBASIC16.64■□□□□ 0.252e-7■■■■□ 26.1
SRSF1Q07955 MAD1L1-212ENST00000450235 850 ntTSL 316.51■□□□□ 0.232e-7■■■■□ 26.1
SRSF1Q07955 NOM1-205ENST00000475176 714 ntTSL 316.5■□□□□ 0.232e-7■■■■□ 26.1
SRSF1Q07955 NOM1-204ENST00000472491 593 ntTSL 316.5■□□□□ 0.232e-7■■■■□ 26.1
SRSF1Q07955 NSUN5P2-204ENST00000485741 1647 ntTSL 1 (best)15.99■□□□□ 0.152e-7■■■■□ 26.1
SRSF1Q07955 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.94■□□□□ 0.142e-7■■■■□ 26.1
SRSF1Q07955 RCCD1-207ENST00000556774 139 ntTSL 315.77■□□□□ 0.122e-7■■■■□ 26.1
SRSF1Q07955 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.012e-7■■■■□ 26.1
SRSF1Q07955 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.062e-7■■■■□ 26.1
SRSF1Q07955 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.59□□□□□ -0.072e-7■■■■□ 26.1
SRSF1Q07955 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.93□□□□□ -0.182e-7■■■■□ 26.1
SRSF1Q07955 CLCN7-206ENST00000563822 851 ntTSL 513.84□□□□□ -0.192e-7■■■■□ 26.1
SRSF1Q07955 RCCD1-204ENST00000555737 3157 ntTSL 1 (best)13.61□□□□□ -0.232e-7■■■■□ 26.1
SRSF1Q07955 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.33□□□□□ -0.282e-7■■■■□ 26.1
SRSF1Q07955 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.282e-7■■■■□ 26.1
SRSF1Q07955 MAD1L1-219ENST00000481633 548 ntTSL 213.08□□□□□ -0.322e-7■■■■□ 26.1
SRSF1Q07955 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.67□□□□□ -0.382e-7■■■■□ 26.1
SRSF1Q07955 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-7■■■■□ 26.1
SRSF1Q07955 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.69□□□□□ -0.542e-7■■■■□ 26.1
SRSF1Q07955 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.06□□□□□ -0.642e-7■■■■□ 26.1
SRSF1Q07955 NCOR1-223ENST00000583226 614 ntTSL 58.35□□□□□ -1.072e-7■■■■□ 26.1
SRSF1Q07955 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.42e-7■■■■□ 26.1
SRSF1Q07955 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.462e-7■■■■□ 26.1
SRSF1Q07955 ANLN-210ENST00000457743 757 ntTSL 55.85□□□□□ -1.472e-7■■■■□ 26.1
SRSF1Q07955 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.44□□□□□ -1.542e-7■■■■□ 26.1
SRSF1Q07955 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.4□□□□□ -1.552e-7■■■■□ 26.1
SRSF1Q07955 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.38□□□□□ -1.552e-7■■■■□ 26.1
SRSF1Q07955 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.562e-7■■■■□ 26.1
SRSF1Q07955 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.09□□□□□ -1.592e-7■■■■□ 26.1
SRSF1Q07955 ANLN-205ENST00000428612 707 ntTSL 55.08□□□□□ -1.62e-7■■■■□ 26.1
SRSF1Q07955 TMEM2-211ENST00000543165 542 ntTSL 213.07□□□□□ -0.322e-22■■■■□ 26
SRSF1Q07955 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.62e-22■■■■□ 26
SRSF1Q07955 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.212e-22■■■■□ 26
SRSF1Q07955 TMEM2-210ENST00000542935 5372 ntTSL 1 (best)6.72□□□□□ -1.332e-22■■■■□ 26
SRSF1Q07955 TMEM2-212ENST00000545719 533 ntTSL 44.76□□□□□ -1.652e-22■■■■□ 26
SRSF1Q07955 PACSIN2-210ENST00000453643 818 ntTSL 515.42■□□□□ 0.063e-14■■■■□ 25.9
SRSF1Q07955 PACSIN2-208ENST00000445706 511 ntTSL 512.63□□□□□ -0.393e-14■■■■□ 25.9
SRSF1Q07955 LONP1-205ENST00000587365 641 ntTSL 522.62■■□□□ 1.212e-8■■■■□ 25.9
SRSF1Q07955 UHRF1-202ENST00000613817 1859 ntTSL 217.35■□□□□ 0.371e-7■■■■□ 25.9
SRSF1Q07955 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.051e-7■■■■□ 25.9
SRSF1Q07955 DNMT3A-207ENST00000461228 581 ntTSL 514.62□□□□□ -0.072e-8■■■■□ 25.9
SRSF1Q07955 TACC3-207ENST00000470808 947 ntTSL 214.57□□□□□ -0.082e-8■■■■□ 25.9
SRSF1Q07955 DNMT3A-211ENST00000474887 847 ntTSL 313.39□□□□□ -0.272e-8■■■■□ 25.9
SRSF1Q07955 DNMT3A-208ENST00000466601 812 ntTSL 213□□□□□ -0.332e-8■■■■□ 25.9
SRSF1Q07955 DNMT3A-214ENST00000491288 472 ntTSL 312.84□□□□□ -0.352e-8■■■■□ 25.9
SRSF1Q07955 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.521e-7■■■■□ 25.9
SRSF1Q07955 TACC3-202ENST00000404054 2771 nt11.33□□□□□ -0.592e-8■■■■□ 25.9
SRSF1Q07955 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.622e-8■■■■□ 25.9
SRSF1Q07955 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC9.57□□□□□ -0.881e-7■■■■□ 25.9
SRSF1Q07955 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -11e-7■■■■□ 25.9
SRSF1Q07955 UHRF1-201ENST00000612630 4309 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.051e-7■■■■□ 25.9
SRSF1Q07955 UHRF1-205ENST00000620565 3965 ntTSL 1 (best) BASIC8.42□□□□□ -1.061e-7■■■■□ 25.9
SRSF1Q07955 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC8.29□□□□□ -1.082e-8■■■■□ 25.9
SRSF1Q07955 DNMT3A-212ENST00000482935 519 ntTSL 57.59□□□□□ -1.192e-8■■■■□ 25.9
SRSF1Q07955 ELOVL5-206ENST00000486973 794 ntTSL 312□□□□□ -0.494e-8■■■■□ 25.8
SRSF1Q07955 ELOVL5-204ENST00000465983 696 ntTSL 311.93□□□□□ -0.54e-8■■■■□ 25.8
SRSF1Q07955 ELOVL5-205ENST00000485336 761 ntTSL 510.46□□□□□ -0.734e-8■■■■□ 25.8
SRSF1Q07955 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC10.03□□□□□ -0.84e-8■■■■□ 25.8
SRSF1Q07955 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.27□□□□□ -1.254e-8■■■■□ 25.8
SRSF1Q07955 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.254e-8■■■■□ 25.8
SRSF1Q07955 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.28□□□□□ -1.564e-8■■■■□ 25.8
Retrieved 100 of 14,836 protein–RNA pairs in 162 ms