RNA–Protein interactions for RNA: ENST00000607772.5

CNKSR3-205, Transcript of CNKSR family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR3, Length 21,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-205ENST00000607772 MYT1Q01538 1121 aa11.97□□□□□ -0.49
CNKSR3-205ENST00000607772 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
CNKSR3-205ENST00000607772 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
CNKSR3-205ENST00000607772 SUPT5HO00267 1087 aaKnown RBP11.32□□□□□ -0.6
CNKSR3-205ENST00000607772 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
CNKSR3-205ENST00000607772 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.62
CNKSR3-205ENST00000607772 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
CNKSR3-205ENST00000607772 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
CNKSR3-205ENST00000607772 CENPBP07199 599 aaPredicted RBP11.08□□□□□ -0.64
CNKSR3-205ENST00000607772 CCER1Q8TC90 406 aaPredicted RBP11.03□□□□□ -0.64
CNKSR3-205ENST00000607772 ZEB1P37275 1124 aaPredicted RBP10.84□□□□□ -0.67
CNKSR3-205ENST00000607772 NISCHQ9Y2I1 1504 aa10.84□□□□□ -0.67
CNKSR3-205ENST00000607772 YTHDC1Q96MU7 727 aaKnown RBP10.81□□□□□ -0.68
CNKSR3-205ENST00000607772 PCGF6Q9BYE7 350 aa10.79□□□□□ -0.68
CNKSR3-205ENST00000607772 FAM9AQ8IZU1 332 aaPredicted RBP10.78□□□□□ -0.68
CNKSR3-205ENST00000607772 NEFLP07196 543 aa10.68□□□□□ -0.7
CNKSR3-205ENST00000607772 APLP2Q06481 763 aa10.65□□□□□ -0.7
CNKSR3-205ENST00000607772 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
CNKSR3-205ENST00000607772 HRCP23327 699 aa10.51□□□□□ -0.73
CNKSR3-205ENST00000607772 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
CNKSR3-205ENST00000607772 PPARGC1BQ86YN6 1023 aaKnown RBP10.46□□□□□ -0.74
CNKSR3-205ENST00000607772 ATP1B4Q9UN42 357 aaPredicted RBP10.43□□□□□ -0.74
CNKSR3-205ENST00000607772 DAXXQ9UER7 740 aaPredicted RBP10.42□□□□□ -0.74
CNKSR3-205ENST00000607772 UBTFP17480 764 aaKnown RBP10.32□□□□□ -0.76
CNKSR3-205ENST00000607772 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
CNKSR3-205ENST00000607772 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
CNKSR3-205ENST00000607772 GON4LQ3T8J9 2241 aa10.27□□□□□ -0.77
CNKSR3-205ENST00000607772 MYT1LQ9UL68 1186 aa10.21□□□□□ -0.78
CNKSR3-205ENST00000607772 ZNF316A6NFI3 1004 aaPredicted RBP10.19□□□□□ -0.78
CNKSR3-205ENST00000607772 KAT6BQ8WYB5 2073 aa10.19□□□□□ -0.78
CNKSR3-205ENST00000607772 LOC105371045A0A1W2PR82 267 aa10.17□□□□□ -0.78
CNKSR3-205ENST00000607772 EIF5BO60841 1220 aaKnown RBP10.15□□□□□ -0.78
CNKSR3-205ENST00000607772 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
CNKSR3-205ENST00000607772 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
CNKSR3-205ENST00000607772 POLR3GLQ9BT43 218 aa10.14□□□□□ -0.79
CNKSR3-205ENST00000607772 CNGB1Q14028 1251 aaPredicted RBP10.13□□□□□ -0.79
CNKSR3-205ENST00000607772 ITGAEP38570 1179 aa10.12□□□□□ -0.79
CNKSR3-205ENST00000607772 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
CNKSR3-205ENST00000607772 DIEXFQ68CQ4 756 aaKnown RBP10.05□□□□□ -0.8
CNKSR3-205ENST00000607772 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
CNKSR3-205ENST00000607772 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
CNKSR3-205ENST00000607772 CDK11AQ9UQ88 783 aaPredicted RBP9.99□□□□□ -0.81
CNKSR3-205ENST00000607772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
CNKSR3-205ENST00000607772 BCL11AQ9H165 835 aa9.96□□□□□ -0.82
CNKSR3-205ENST00000607772 CHIC1Q5VXU3 224 aa9.94□□□□□ -0.82
CNKSR3-205ENST00000607772 ANP32AP39687 249 aaKnown RBP9.93□□□□□ -0.82
CNKSR3-205ENST00000607772 BCANQ96GW7 911 aa9.92□□□□□ -0.82
CNKSR3-205ENST00000607772 SLC4A1APQ9BWU0 796 aaKnown RBP9.86□□□□□ -0.83
CNKSR3-205ENST00000607772 ANP32EQ9BTT0 268 aa9.84□□□□□ -0.83
CNKSR3-205ENST00000607772 ANP32BQ92688 251 aaKnown RBP9.84□□□□□ -0.83
CNKSR3-205ENST00000607772 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
CNKSR3-205ENST00000607772 NEUROD1Q13562 356 aa9.82□□□□□ -0.84
CNKSR3-205ENST00000607772 TNNT2P45379 298 aaPredicted RBP9.81□□□□□ -0.84
CNKSR3-205ENST00000607772 FAM50AQ14320 339 aaKnown RBP9.77□□□□□ -0.85
CNKSR3-205ENST00000607772 NBR1Q14596 966 aa9.72□□□□□ -0.85
CNKSR3-205ENST00000607772 TRIM52Q96A61 297 aa9.69□□□□□ -0.86
CNKSR3-205ENST00000607772 NCLP19338 710 aaKnown RBP9.69□□□□□ -0.86
CNKSR3-205ENST00000607772 ZNF326Q5BKZ1 582 aaKnown RBP9.67□□□□□ -0.86
CNKSR3-205ENST00000607772 CDK11BP21127 795 aaKnown RBP9.66□□□□□ -0.86
CNKSR3-205ENST00000607772 ANP32CO43423 234 aa9.63□□□□□ -0.87
CNKSR3-205ENST00000607772 SLC24A1O60721 1099 aa9.63□□□□□ -0.87
CNKSR3-205ENST00000607772 ERICH6BQ5W0A0 696 aa9.63□□□□□ -0.87
CNKSR3-205ENST00000607772 ZBTB47Q9UFB7 747 aaPredicted RBP9.63□□□□□ -0.87
CNKSR3-205ENST00000607772 TRIM44Q96DX7 344 aaPredicted RBP9.61□□□□□ -0.87
CNKSR3-205ENST00000607772 NPM2Q86SE8 214 aaKnown RBP9.61□□□□□ -0.87
CNKSR3-205ENST00000607772 NEFMP07197 916 aa9.6□□□□□ -0.87
CNKSR3-205ENST00000607772 PABPN1Q86U42 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
CNKSR3-205ENST00000607772 ARID3CA6NKF2 412 aa9.57□□□□□ -0.88
CNKSR3-205ENST00000607772 NAP1L5Q96NT1 182 aaPredicted RBP9.57□□□□□ -0.88
CNKSR3-205ENST00000607772 FKBP8Q14318 412 aa9.55□□□□□ -0.88
CNKSR3-205ENST00000607772 GOLGA4Q13439 2230 aaKnown RBP9.54□□□□□ -0.88
CNKSR3-205ENST00000607772 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
CNKSR3-205ENST00000607772 CCDC180Q9P1Z9 1646 aa9.52□□□□□ -0.89
CNKSR3-205ENST00000607772 DEKP35659 375 aaKnown RBP9.51□□□□□ -0.89
CNKSR3-205ENST00000607772 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
CNKSR3-205ENST00000607772 CANXP27824 592 aaKnown RBP9.5□□□□□ -0.89
CNKSR3-205ENST00000607772 UPF2Q9HAU5 1272 aaKnown RBP9.5□□□□□ -0.89
CNKSR3-205ENST00000607772 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
CNKSR3-205ENST00000607772 DCAF1Q9Y4B6 1507 aa9.49□□□□□ -0.89
CNKSR3-205ENST00000607772 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
CNKSR3-205ENST00000607772 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.89
CNKSR3-205ENST00000607772 ARXQ96QS3 562 aa9.46□□□□□ -0.89
CNKSR3-205ENST00000607772 FBLN2P98095 1184 aa9.44□□□□□ -0.9
CNKSR3-205ENST00000607772 ABCC9O60706 1549 aa9.43□□□□□ -0.9
CNKSR3-205ENST00000607772 NOP58Q9Y2X3 529 aaKnown RBP9.42□□□□□ -0.9
CNKSR3-205ENST00000607772 PPM1GO15355 546 aaPredicted RBP9.42□□□□□ -0.9
CNKSR3-205ENST00000607772 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
CNKSR3-205ENST00000607772 DDX10Q13206 875 aaKnown RBP9.42□□□□□ -0.9
CNKSR3-205ENST00000607772 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
CNKSR3-205ENST00000607772 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
CNKSR3-205ENST00000607772 BECN1Q14457 450 aa9.41□□□□□ -0.9
CNKSR3-205ENST00000607772 MYO10Q9HD67 2058 aa9.4□□□□□ -0.9
CNKSR3-205ENST00000607772 ZNF777Q9ULD5 760 aaPredicted RBP9.4□□□□□ -0.91
CNKSR3-205ENST00000607772 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
CNKSR3-205ENST00000607772 BAZ2BQ9UIF8 2168 aaKnown RBP9.39□□□□□ -0.91
CNKSR3-205ENST00000607772 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
CNKSR3-205ENST00000607772 CNTRLQ7Z7A1 2325 aa9.38□□□□□ -0.91
CNKSR3-205ENST00000607772 PTMSP20962 102 aa9.38□□□□□ -0.91
CNKSR3-205ENST00000607772 KNL1Q8NG31 2342 aa9.37□□□□□ -0.91
CNKSR3-205ENST00000607772 RSPH6AQ9H0K4 717 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms