Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNRPEP62304 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.58■□□□□ 0.72
SNRPEP62304 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPEP62304 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPEP62304 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.57■□□□□ 0.72
SNRPEP62304 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPEP62304 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPEP62304 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPEP62304 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SNRPEP62304 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPEP62304 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPEP62304 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPEP62304 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPEP62304 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPEP62304 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPEP62304 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPEP62304 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPEP62304 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SNRPEP62304 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPEP62304 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPEP62304 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPEP62304 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.54■□□□□ 0.72
SNRPEP62304 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SNRPEP62304 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPEP62304 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPEP62304 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPEP62304 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SNRPEP62304 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPEP62304 AL135925.1-201ENST00000605920 1701 ntBASIC19.53■□□□□ 0.72
SNRPEP62304 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.53■□□□□ 0.72
SNRPEP62304 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.52■□□□□ 0.72
SNRPEP62304 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRPEP62304 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRPEP62304 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRPEP62304 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SNRPEP62304 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNRPEP62304 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRPEP62304 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.51■□□□□ 0.71
SNRPEP62304 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRPEP62304 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SNRPEP62304 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SNRPEP62304 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.49■□□□□ 0.71
SNRPEP62304 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPEP62304 AC068473.5-201ENST00000616428 2072 ntBASIC19.49■□□□□ 0.71
SNRPEP62304 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPEP62304 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPEP62304 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SNRPEP62304 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPEP62304 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPEP62304 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNRPEP62304 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNRPEP62304 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNRPEP62304 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRPEP62304 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRPEP62304 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRPEP62304 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SNRPEP62304 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRPEP62304 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRPEP62304 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRPEP62304 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNRPEP62304 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SNRPEP62304 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.45■□□□□ 0.7
SNRPEP62304 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPEP62304 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPEP62304 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPEP62304 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRPEP62304 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.43■□□□□ 0.7
SNRPEP62304 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRPEP62304 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRPEP62304 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRPEP62304 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNRPEP62304 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRPEP62304 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRPEP62304 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRPEP62304 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRPEP62304 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRPEP62304 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPEP62304 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNRPEP62304 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRPEP62304 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPEP62304 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SNRPEP62304 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPEP62304 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPEP62304 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPEP62304 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPEP62304 AL024507.2-201ENST00000606070 2574 ntBASIC19.4■□□□□ 0.7
SNRPEP62304 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPEP62304 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPEP62304 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPEP62304 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRPEP62304 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRPEP62304 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SNRPEP62304 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SNRPEP62304 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRPEP62304 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.39■□□□□ 0.7
SNRPEP62304 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPEP62304 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPEP62304 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPEP62304 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SNRPEP62304 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms