Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.258e-7■■■■■ 30.1
NCBP2P52298 PPIA-207ENST00000481437 570 ntTSL 25.57□□□□□ -1.528e-7■■■■■ 30.1
NCBP2P52298 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.39□□□□□ -1.558e-7■■■■■ 30.1
NCBP2P52298 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.6■□□□□ 0.894e-10■■■■■ 30.1
NCBP2P52298 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.884e-10■■■■■ 30.1
NCBP2P52298 TMEM165-205ENST00000508404 1657 ntTSL 220.45■□□□□ 0.864e-10■■■■■ 30.1
NCBP2P52298 ADAR-206ENST00000494866 471 ntTSL 213.24□□□□□ -0.295e-31■■■■■ 30
NCBP2P52298 ADAR-204ENST00000471068 577 ntTSL 410.92□□□□□ -0.665e-31■■■■■ 30
NCBP2P52298 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.815e-31■■■■■ 30
NCBP2P52298 ADAR-203ENST00000463920 2347 ntTSL 28.07□□□□□ -1.125e-31■■■■■ 30
NCBP2P52298 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.79■□□□□ 0.927e-8■■■■■ 30
NCBP2P52298 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.527e-8■■■■■ 30
NCBP2P52298 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.517e-8■■■■■ 30
NCBP2P52298 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.287e-8■■■■■ 30
NCBP2P52298 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.387e-8■■■■■ 30
NCBP2P52298 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC11.88□□□□□ -0.517e-8■■■■■ 30
NCBP2P52298 HIGD1A-205ENST00000470543 983 ntTSL 211.09□□□□□ -0.637e-8■■■■■ 30
NCBP2P52298 PRKD3-203ENST00000443187 695 ntTSL 410.25□□□□□ -0.772e-9■■■■■ 30
NCBP2P52298 AC099329.1-201ENST00000625589 539 ntTSL 54.67□□□□□ -1.667e-8■■■■■ 30
NCBP2P52298 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.731e-7■■■■■ 30
NCBP2P52298 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.831e-7■■■■■ 30
NCBP2P52298 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.09■■□□□ 1.132e-8■■■■■ 30
NCBP2P52298 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.07■□□□□ 0.82e-8■■■■■ 30
NCBP2P52298 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.692e-8■■■■■ 30
NCBP2P52298 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.622e-8■■■■■ 30
NCBP2P52298 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.452e-8■■■■■ 30
NCBP2P52298 SCRN2-208ENST00000581645 1477 ntTSL 517.76■□□□□ 0.432e-8■■■■■ 30
NCBP2P52298 SCRN2-205ENST00000579856 952 ntTSL 516.31■□□□□ 0.22e-8■■■■■ 30
NCBP2P52298 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.22■□□□□ 0.192e-8■■■■■ 30
NCBP2P52298 SCRN2-203ENST00000578323 624 ntTSL 514.01□□□□□ -0.172e-8■■■■■ 30
NCBP2P52298 SCRN2-207ENST00000581546 1237 ntTSL 1 (best)14□□□□□ -0.172e-8■■■■■ 30
NCBP2P52298 SCRN2-204ENST00000578840 912 ntTSL 313.4□□□□□ -0.262e-8■■■■■ 30
NCBP2P52298 SCRN2-206ENST00000580428 717 ntTSL 213.03□□□□□ -0.322e-8■■■■■ 30
NCBP2P52298 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.732e-8■■■■■ 30
NCBP2P52298 PPP1R3C-201ENST00000238994 2524 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.812e-8■■■■■ 30
NCBP2P52298 SF3B6-202ENST00000478050 720 ntTSL 24.62□□□□□ -1.672e-8■■■■■ 30
NCBP2P52298 CIZ1-211ENST00000467178 904 ntTSL 320.6■□□□□ 0.894e-7■■■■■ 29.9
NCBP2P52298 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.764e-7■■■■■ 29.9
NCBP2P52298 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.754e-7■■■■■ 29.9
NCBP2P52298 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.714e-7■■■■■ 29.9
NCBP2P52298 CIZ1-221ENST00000488559 952 ntTSL 518.44■□□□□ 0.544e-7■■■■■ 29.9
NCBP2P52298 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.374e-7■■■■■ 29.9
NCBP2P52298 CIZ1-218ENST00000476727 1205 ntTSL 515.98■□□□□ 0.154e-7■■■■■ 29.9
NCBP2P52298 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.484e-7■■■■■ 29.9
NCBP2P52298 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.534e-7■■■■■ 29.9
NCBP2P52298 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.734e-7■■■■■ 29.9
NCBP2P52298 CIZ1-202ENST00000324544 809 ntTSL 39.54□□□□□ -0.884e-7■■■■■ 29.9
NCBP2P52298 CAP2-204ENST00000476263 891 ntTSL 511.2□□□□□ -0.626e-8■■■■■ 29.9
NCBP2P52298 MOB1A-202ENST00000463975 1799 ntTSL 215.6■□□□□ 0.092e-15■■■■■ 29.9
NCBP2P52298 MOB1A-203ENST00000488006 482 ntTSL 314.3□□□□□ -0.122e-15■■■■■ 29.9
NCBP2P52298 MOB1A-206ENST00000497054 784 ntTSL 212.21□□□□□ -0.452e-15■■■■■ 29.9
NCBP2P52298 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.622e-15■■■■■ 29.9
NCBP2P52298 MOB1A-204ENST00000494600 493 ntTSL 29.58□□□□□ -0.882e-15■■■■■ 29.9
NCBP2P52298 EP400-202ENST00000332482 2588 ntTSL 1 (best)18.55■□□□□ 0.562e-6■■■■■ 29.8
NCBP2P52298 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.442e-6■■■■■ 29.8
NCBP2P52298 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■■■■■ 29.8
NCBP2P52298 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.182e-6■■■■■ 29.8
NCBP2P52298 PFKL-209ENST00000495274 951 ntTSL 215.23■□□□□ 0.032e-6■■■■■ 29.8
NCBP2P52298 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.45□□□□□ -0.12e-6■■■■■ 29.8
NCBP2P52298 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)13.51□□□□□ -0.259e-7■■■■■ 29.8
NCBP2P52298 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.342e-6■■■■■ 29.8
NCBP2P52298 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.372e-6■■■■■ 29.8
NCBP2P52298 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.42e-6■■■■■ 29.8
NCBP2P52298 USP20-207ENST00000491731 821 ntTSL 212.16□□□□□ -0.462e-6■■■■■ 29.8
NCBP2P52298 BRD4-210ENST00000601941 604 ntTSL 511.65□□□□□ -0.549e-7■■■■■ 29.8
NCBP2P52298 USP20-205ENST00000474895 825 ntTSL 511.58□□□□□ -0.562e-6■■■■■ 29.8
NCBP2P52298 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.592e-6■■■■■ 29.8
NCBP2P52298 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.982e-6■■■■■ 29.8
NCBP2P52298 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.032e-6■■■■■ 29.8
NCBP2P52298 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.39■□□□□ 0.052e-8■■■■■ 29.8
NCBP2P52298 ZNF655-220ENST00000488751 924 ntTSL 313.79□□□□□ -0.21e-19■■■■■ 29.8
NCBP2P52298 ZNF655-209ENST00000422422 782 ntTSL 311.36□□□□□ -0.591e-19■■■■■ 29.8
NCBP2P52298 AATK-202ENST00000374792 4938 ntTSL 219.13■□□□□ 0.657e-7■■■■■ 29.7
NCBP2P52298 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.267e-7■■■■■ 29.7
NCBP2P52298 AATK-206ENST00000572798 407 ntTSL 211.84□□□□□ -0.517e-7■■■■■ 29.7
NCBP2P52298 CDK5RAP2-214ENST00000481266 970 ntTSL 518.16■□□□□ 0.53e-29■■■■■ 29.6
NCBP2P52298 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)12.5□□□□□ -0.413e-29■■■■■ 29.6
NCBP2P52298 CDK5RAP2-209ENST00000473282 5956 ntTSL 1 (best)7.5□□□□□ -1.213e-29■■■■■ 29.6
NCBP2P52298 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.552e-10■■■■■ 29.6
NCBP2P52298 TLN2-210ENST00000561322 249 ntTSL 522.46■■□□□ 1.191e-8■■■■■ 29.5
NCBP2P52298 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)16.78■□□□□ 0.281e-8■■■■■ 29.5
NCBP2P52298 GGA3-220ENST00000613421 5156 ntTSL 213.42□□□□□ -0.264e-7■■■■■ 29.5
NCBP2P52298 GGA3-215ENST00000582821 1018 ntTSL 212.83□□□□□ -0.364e-7■■■■■ 29.5
NCBP2P52298 GGA3-203ENST00000577435 547 ntTSL 412.83□□□□□ -0.364e-7■■■■■ 29.5
NCBP2P52298 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.67□□□□□ -0.384e-7■■■■■ 29.5
NCBP2P52298 GGA3-208ENST00000579743 560 ntTSL 412.47□□□□□ -0.414e-7■■■■■ 29.5
NCBP2P52298 GGA3-205ENST00000578348 2251 ntTSL 2 BASIC10.7□□□□□ -0.74e-7■■■■■ 29.5
NCBP2P52298 GGA3-213ENST00000582486 2319 ntTSL 5 BASIC10.59□□□□□ -0.714e-7■■■■■ 29.5
NCBP2P52298 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.844e-7■■■■■ 29.5
NCBP2P52298 GGA3-210ENST00000580799 521 ntTSL 59.22□□□□□ -0.934e-7■■■■■ 29.5
NCBP2P52298 GGA3-223ENST00000621870 4034 ntTSL 1 (best)9.02□□□□□ -0.974e-7■■■■■ 29.5
NCBP2P52298 GGA3-222ENST00000621217 4181 ntTSL 28.65□□□□□ -1.024e-7■■■■■ 29.5
NCBP2P52298 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.3□□□□□ -1.084e-7■■■■■ 29.5
NCBP2P52298 GGA3-212ENST00000582376 551 ntTSL 47.92□□□□□ -1.144e-7■■■■■ 29.5
NCBP2P52298 GGA3-218ENST00000584243 646 ntTSL 37.48□□□□□ -1.214e-7■■■■■ 29.5
NCBP2P52298 SMAP2-203ENST00000435168 666 ntTSL 56.44□□□□□ -1.381e-8■■■■■ 29.5
NCBP2P52298 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.452e-8■■■■■ 29.3
NCBP2P52298 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.75■■□□□ 1.072e-8■■■■■ 29.3
NCBP2P52298 GAK-207ENST00000505819 1326 ntTSL 519.6■□□□□ 0.732e-8■■■■■ 29.3
NCBP2P52298 GAK-219ENST00000512325 577 ntTSL 319.2■□□□□ 0.662e-8■■■■■ 29.3
Retrieved 100 of 18,329 protein–RNA pairs in 474.9 ms