Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.18■■□□□ 1.46
CLCN2P51788 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN2P51788 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN2P51788 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN2P51788 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN2P51788 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN2P51788 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.15■■□□□ 1.46
CLCN2P51788 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN2P51788 LINC01971-201ENST00000617888 1048 ntBASIC24.15■■□□□ 1.46
CLCN2P51788 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN2P51788 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN2P51788 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLCN2P51788 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CLCN2P51788 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.14■■□□□ 1.45
CLCN2P51788 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CLCN2P51788 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.13■■□□□ 1.45
CLCN2P51788 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN2P51788 AC127502.1-201ENST00000399971 1502 ntBASIC24.13■■□□□ 1.45
CLCN2P51788 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN2P51788 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CLCN2P51788 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLCN2P51788 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLCN2P51788 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.11■■□□□ 1.45
CLCN2P51788 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLCN2P51788 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLCN2P51788 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CLCN2P51788 AP004833.2-201ENST00000532228 1454 ntBASIC24.1■■□□□ 1.45
CLCN2P51788 LINC00273-201ENST00000539813 1452 ntBASIC24.1■■□□□ 1.45
CLCN2P51788 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLCN2P51788 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLCN2P51788 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.09■■□□□ 1.45
CLCN2P51788 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
CLCN2P51788 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.09■■□□□ 1.45
CLCN2P51788 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CLCN2P51788 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CLCN2P51788 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.08■■□□□ 1.45
CLCN2P51788 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.08■■□□□ 1.45
CLCN2P51788 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.08■■□□□ 1.45
CLCN2P51788 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CLCN2P51788 DUX4L11-201ENST00000611504 1267 ntBASIC24.08■■□□□ 1.45
CLCN2P51788 DUX4L12-201ENST00000614593 1267 ntBASIC24.08■■□□□ 1.45
CLCN2P51788 DUX4L14-201ENST00000621227 1267 ntBASIC24.08■■□□□ 1.45
CLCN2P51788 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CLCN2P51788 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.08■■□□□ 1.44
CLCN2P51788 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
CLCN2P51788 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
CLCN2P51788 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.07■■□□□ 1.44
CLCN2P51788 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLCN2P51788 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLCN2P51788 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
CLCN2P51788 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLCN2P51788 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLCN2P51788 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.06■■□□□ 1.44
CLCN2P51788 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCN2P51788 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.05■■□□□ 1.44
CLCN2P51788 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCN2P51788 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCN2P51788 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.05■■□□□ 1.44
CLCN2P51788 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CLCN2P51788 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCN2P51788 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.05■■□□□ 1.44
CLCN2P51788 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.04■■□□□ 1.44
CLCN2P51788 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCN2P51788 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCN2P51788 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.04■■□□□ 1.44
CLCN2P51788 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.04■■□□□ 1.44
CLCN2P51788 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.04■■□□□ 1.44
CLCN2P51788 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLCN2P51788 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLCN2P51788 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLCN2P51788 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
CLCN2P51788 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLCN2P51788 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.03■■□□□ 1.44
CLCN2P51788 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.03■■□□□ 1.44
CLCN2P51788 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.03■■□□□ 1.44
CLCN2P51788 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLCN2P51788 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN2P51788 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN2P51788 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN2P51788 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN2P51788 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CLCN2P51788 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CLCN2P51788 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN2P51788 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CLCN2P51788 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.01■■□□□ 1.43
CLCN2P51788 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.01■■□□□ 1.43
CLCN2P51788 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.01■■□□□ 1.43
CLCN2P51788 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN2P51788 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CLCN2P51788 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN2P51788 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLCN2P51788 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24■■□□□ 1.43
CLCN2P51788 HLA-V-202ENST00000446817 847 ntBASIC24■■□□□ 1.43
CLCN2P51788 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CLCN2P51788 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24■■□□□ 1.43
CLCN2P51788 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CLCN2P51788 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLCN2P51788 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN2P51788 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CLCN2P51788 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 766 ms