Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.34■■□□□ 1.01
MECP2P51608 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MECP2P51608 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MECP2P51608 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
MECP2P51608 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.33■■□□□ 1.01
MECP2P51608 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.33■■□□□ 1.01
MECP2P51608 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.33■■□□□ 1.01
MECP2P51608 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
MECP2P51608 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
MECP2P51608 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.32■■□□□ 1
MECP2P51608 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MECP2P51608 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MECP2P51608 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.32■■□□□ 1
MECP2P51608 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
MECP2P51608 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MECP2P51608 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.31■■□□□ 1
MECP2P51608 WASH5P-204ENST00000632292 975 ntBASIC21.3■■□□□ 1
MECP2P51608 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MECP2P51608 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MECP2P51608 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MECP2P51608 DUSP8P4-201ENST00000399538 1761 ntBASIC21.29■■□□□ 1
MECP2P51608 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.29■■□□□ 1
MECP2P51608 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MECP2P51608 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MECP2P51608 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.28■■□□□ 1
MECP2P51608 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MECP2P51608 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MECP2P51608 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.28■■□□□ 1
MECP2P51608 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.27■■□□□ 1
MECP2P51608 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MECP2P51608 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.27■■□□□ 1
MECP2P51608 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.27■■□□□ 1
MECP2P51608 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.27■■□□□ 1
MECP2P51608 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.27■■□□□ 1
MECP2P51608 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.27■■□□□ 1
MECP2P51608 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MECP2P51608 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.26■□□□□ 0.99
MECP2P51608 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MECP2P51608 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MECP2P51608 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MECP2P51608 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MECP2P51608 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MECP2P51608 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MECP2P51608 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MECP2P51608 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MECP2P51608 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MECP2P51608 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.25■□□□□ 0.99
MECP2P51608 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.25■□□□□ 0.99
MECP2P51608 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.25■□□□□ 0.99
MECP2P51608 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
MECP2P51608 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MECP2P51608 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MECP2P51608 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
MECP2P51608 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.24■□□□□ 0.99
MECP2P51608 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MECP2P51608 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MECP2P51608 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MECP2P51608 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MECP2P51608 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MECP2P51608 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.22■□□□□ 0.99
MECP2P51608 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.21■□□□□ 0.99
MECP2P51608 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MECP2P51608 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MECP2P51608 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MECP2P51608 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.2■□□□□ 0.99
MECP2P51608 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
MECP2P51608 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MECP2P51608 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MECP2P51608 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MECP2P51608 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.19■□□□□ 0.98
MECP2P51608 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MECP2P51608 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MECP2P51608 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MECP2P51608 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.19■□□□□ 0.98
MECP2P51608 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MECP2P51608 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MECP2P51608 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MECP2P51608 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MECP2P51608 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.18■□□□□ 0.98
MECP2P51608 AP002414.2-202ENST00000590929 1450 ntBASIC21.18■□□□□ 0.98
MECP2P51608 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
MECP2P51608 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MECP2P51608 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MECP2P51608 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MECP2P51608 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MECP2P51608 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MECP2P51608 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MECP2P51608 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MECP2P51608 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MECP2P51608 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MECP2P51608 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MECP2P51608 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.15■□□□□ 0.98
MECP2P51608 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MECP2P51608 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MECP2P51608 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MECP2P51608 AC092803.2-201ENST00000564287 1899 ntBASIC21.14■□□□□ 0.97
MECP2P51608 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MECP2P51608 RARRES2P7-201ENST00000567349 469 ntBASIC21.14■□□□□ 0.97
MECP2P51608 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.14■□□□□ 0.97
MECP2P51608 AC100797.4-201ENST00000631653 1827 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms