Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A2P08572 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A2P08572 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A2P08572 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.96■■□□□ 1.75
COL4A2P08572 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL4A2P08572 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.95■■□□□ 1.74
COL4A2P08572 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
COL4A2P08572 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.95■■□□□ 1.74
COL4A2P08572 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A2P08572 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.94■■□□□ 1.74
COL4A2P08572 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A2P08572 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
COL4A2P08572 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A2P08572 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL4A2P08572 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL4A2P08572 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.93■■□□□ 1.74
COL4A2P08572 AL592293.1-201ENST00000502889 1188 ntBASIC25.92■■□□□ 1.74
COL4A2P08572 AC126177.7-201ENST00000547904 679 ntBASIC25.92■■□□□ 1.74
COL4A2P08572 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL4A2P08572 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A2P08572 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A2P08572 AC129492.7-201ENST00000622992 756 ntBASIC25.91■■□□□ 1.74
COL4A2P08572 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A2P08572 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A2P08572 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.91■■□□□ 1.74
COL4A2P08572 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
COL4A2P08572 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.9■■□□□ 1.74
COL4A2P08572 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL4A2P08572 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL4A2P08572 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.89■■□□□ 1.74
COL4A2P08572 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL4A2P08572 AC009831.1-201ENST00000580420 1582 ntBASIC25.89■■□□□ 1.74
COL4A2P08572 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.89■■□□□ 1.73
COL4A2P08572 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL4A2P08572 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.88■■□□□ 1.73
COL4A2P08572 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.87■■□□□ 1.73
COL4A2P08572 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL4A2P08572 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.87■■□□□ 1.73
COL4A2P08572 AC025884.2-201ENST00000553429 711 ntBASIC25.87■■□□□ 1.73
COL4A2P08572 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.87■■□□□ 1.73
COL4A2P08572 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.87■■□□□ 1.73
COL4A2P08572 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL4A2P08572 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL4A2P08572 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL4A2P08572 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL4A2P08572 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL4A2P08572 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL4A2P08572 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
COL4A2P08572 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.85■■□□□ 1.73
COL4A2P08572 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.85■■□□□ 1.73
COL4A2P08572 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
COL4A2P08572 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.84■■□□□ 1.73
COL4A2P08572 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
COL4A2P08572 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A2P08572 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
COL4A2P08572 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A2P08572 AL451085.2-201ENST00000605085 799 ntBASIC25.82■■□□□ 1.72
COL4A2P08572 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL4A2P08572 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
COL4A2P08572 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
COL4A2P08572 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL4A2P08572 AP004833.2-201ENST00000532228 1454 ntBASIC25.81■■□□□ 1.72
COL4A2P08572 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.8■■□□□ 1.72
COL4A2P08572 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.8■■□□□ 1.72
COL4A2P08572 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A2P08572 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A2P08572 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.79■■□□□ 1.72
COL4A2P08572 AC100797.4-201ENST00000631653 1827 ntBASIC25.79■■□□□ 1.72
COL4A2P08572 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL4A2P08572 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL4A2P08572 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.79■■□□□ 1.72
COL4A2P08572 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL4A2P08572 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.79■■□□□ 1.72
COL4A2P08572 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
COL4A2P08572 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
COL4A2P08572 ST7-AS1-201ENST00000456775 1889 ntBASIC25.78■■□□□ 1.72
COL4A2P08572 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A2P08572 AC133552.2-201ENST00000619106 1032 ntBASIC25.78■■□□□ 1.72
COL4A2P08572 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A2P08572 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
COL4A2P08572 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.77■■□□□ 1.72
COL4A2P08572 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.77■■□□□ 1.72
COL4A2P08572 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A2P08572 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A2P08572 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A2P08572 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.76■■□□□ 1.71
COL4A2P08572 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
COL4A2P08572 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
COL4A2P08572 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A2P08572 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.75■■□□□ 1.71
COL4A2P08572 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.75■■□□□ 1.71
COL4A2P08572 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.75■■□□□ 1.71
COL4A2P08572 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.75■■□□□ 1.71
COL4A2P08572 DUX4L9-201ENST00000449051 1259 ntBASIC25.74■■□□□ 1.71
COL4A2P08572 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL4A2P08572 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL4A2P08572 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL4A2P08572 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL4A2P08572 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL4A2P08572 AC093536.1-201ENST00000569153 554 ntBASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms