Protein–RNA interactions for Protein: P02743

APCS, Serum amyloid P-component, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCSP02743 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APCSP02743 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APCSP02743 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.83■□□□□ 0.6
APCSP02743 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
APCSP02743 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APCSP02743 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APCSP02743 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCSP02743 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCSP02743 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APCSP02743 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCSP02743 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCSP02743 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.82■□□□□ 0.6
APCSP02743 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCSP02743 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APCSP02743 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.81■□□□□ 0.6
APCSP02743 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APCSP02743 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APCSP02743 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.8■□□□□ 0.6
APCSP02743 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
APCSP02743 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCSP02743 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCSP02743 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCSP02743 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
APCSP02743 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APCSP02743 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APCSP02743 AP004833.2-201ENST00000532228 1454 ntBASIC18.79■□□□□ 0.6
APCSP02743 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APCSP02743 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APCSP02743 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.79■□□□□ 0.6
APCSP02743 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.78■□□□□ 0.6
APCSP02743 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCSP02743 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCSP02743 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APCSP02743 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APCSP02743 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.77■□□□□ 0.6
APCSP02743 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APCSP02743 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APCSP02743 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
APCSP02743 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APCSP02743 DYNLL1-208ENST00000550178 581 ntBASIC18.77■□□□□ 0.6
APCSP02743 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
APCSP02743 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.77■□□□□ 0.59
APCSP02743 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
APCSP02743 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APCSP02743 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.76■□□□□ 0.59
APCSP02743 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APCSP02743 AC010864.1-201ENST00000609407 1511 ntBASIC18.75■□□□□ 0.59
APCSP02743 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APCSP02743 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
APCSP02743 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.74■□□□□ 0.59
APCSP02743 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
APCSP02743 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APCSP02743 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
APCSP02743 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APCSP02743 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.73■□□□□ 0.59
APCSP02743 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APCSP02743 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APCSP02743 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APCSP02743 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APCSP02743 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
APCSP02743 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
APCSP02743 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
APCSP02743 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
APCSP02743 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.71■□□□□ 0.59
APCSP02743 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
APCSP02743 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APCSP02743 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
APCSP02743 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.71■□□□□ 0.59
APCSP02743 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APCSP02743 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
APCSP02743 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.7■□□□□ 0.58
APCSP02743 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
APCSP02743 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APCSP02743 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APCSP02743 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.7■□□□□ 0.58
APCSP02743 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APCSP02743 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APCSP02743 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APCSP02743 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.69■□□□□ 0.58
APCSP02743 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APCSP02743 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
APCSP02743 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
APCSP02743 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APCSP02743 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.68■□□□□ 0.58
APCSP02743 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APCSP02743 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APCSP02743 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APCSP02743 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APCSP02743 DUSP8P4-201ENST00000399538 1761 ntBASIC18.67■□□□□ 0.58
APCSP02743 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APCSP02743 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APCSP02743 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.66■□□□□ 0.58
APCSP02743 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APCSP02743 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APCSP02743 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APCSP02743 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APCSP02743 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.65■□□□□ 0.58
APCSP02743 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APCSP02743 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
APCSP02743 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms