Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-AP01891 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-AP01891 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-AP01891 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HLA-AP01891 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-AP01891 SETD8P1-201ENST00000623146 1180 ntBASIC21.06■□□□□ 0.96
HLA-AP01891 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-AP01891 AC100797.4-201ENST00000631653 1827 ntBASIC21.06■□□□□ 0.96
HLA-AP01891 AC093323.1-202ENST00000635031 2045 ntBASIC21.05■□□□□ 0.96
HLA-AP01891 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-AP01891 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-AP01891 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-AP01891 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HLA-AP01891 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-AP01891 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-AP01891 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-AP01891 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HLA-AP01891 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-AP01891 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-AP01891 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-AP01891 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-AP01891 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.03■□□□□ 0.96
HLA-AP01891 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-AP01891 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-AP01891 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-AP01891 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-AP01891 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.02■□□□□ 0.96
HLA-AP01891 AL133380.1-201ENST00000506013 324 ntBASIC21.02■□□□□ 0.96
HLA-AP01891 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-AP01891 AC127502.1-201ENST00000399971 1502 ntBASIC21.02■□□□□ 0.96
HLA-AP01891 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
HLA-AP01891 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-AP01891 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-AP01891 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HLA-AP01891 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-AP01891 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21■□□□□ 0.95
HLA-AP01891 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-AP01891 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-AP01891 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-AP01891 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-AP01891 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HLA-AP01891 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-AP01891 AP002414.2-202ENST00000590929 1450 ntBASIC20.98■□□□□ 0.95
HLA-AP01891 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-AP01891 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-AP01891 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
HLA-AP01891 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-AP01891 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-AP01891 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-AP01891 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-AP01891 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-AP01891 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-AP01891 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-AP01891 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-AP01891 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
HLA-AP01891 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-AP01891 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-AP01891 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HLA-AP01891 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-AP01891 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-AP01891 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-AP01891 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-AP01891 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-AP01891 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-AP01891 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-AP01891 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-AP01891 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-AP01891 AC097358.2-201ENST00000607541 1159 ntBASIC20.93■□□□□ 0.94
HLA-AP01891 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
HLA-AP01891 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-AP01891 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-AP01891 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-AP01891 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HLA-AP01891 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.92■□□□□ 0.94
HLA-AP01891 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-AP01891 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-AP01891 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-AP01891 DUSP8P4-201ENST00000399538 1761 ntBASIC20.91■□□□□ 0.94
HLA-AP01891 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HLA-AP01891 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HLA-AP01891 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-AP01891 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-AP01891 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-AP01891 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-AP01891 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-AP01891 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-AP01891 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-AP01891 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-AP01891 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-AP01891 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-AP01891 AC136428.2-201ENST00000563187 214 ntBASIC20.89■□□□□ 0.93
HLA-AP01891 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HLA-AP01891 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-AP01891 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HLA-AP01891 AC092803.2-201ENST00000564287 1899 ntBASIC20.88■□□□□ 0.93
HLA-AP01891 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-AP01891 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-AP01891 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-AP01891 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-AP01891 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms