Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF253O75346 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF253O75346 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF253O75346 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ZNF253O75346 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF253O75346 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF253O75346 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF253O75346 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF253O75346 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF253O75346 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF253O75346 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF253O75346 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF253O75346 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF253O75346 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF253O75346 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF253O75346 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF253O75346 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZNF253O75346 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF253O75346 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF253O75346 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF253O75346 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ZNF253O75346 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF253O75346 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF253O75346 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF253O75346 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF253O75346 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF253O75346 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF253O75346 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF253O75346 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF253O75346 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF253O75346 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF253O75346 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ZNF253O75346 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF253O75346 MIR762-201ENST00000390236 83 ntBASIC19.29■□□□□ 0.68
ZNF253O75346 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF253O75346 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF253O75346 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF253O75346 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF253O75346 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF253O75346 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF253O75346 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF253O75346 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF253O75346 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF253O75346 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF253O75346 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF253O75346 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF253O75346 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF253O75346 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF253O75346 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF253O75346 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF253O75346 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF253O75346 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF253O75346 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF253O75346 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF253O75346 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF253O75346 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF253O75346 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF253O75346 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF253O75346 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF253O75346 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF253O75346 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF253O75346 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF253O75346 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF253O75346 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF253O75346 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF253O75346 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF253O75346 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF253O75346 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF253O75346 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF253O75346 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF253O75346 AC018358.1-201ENST00000631079 1402 ntBASIC19.22■□□□□ 0.67
ZNF253O75346 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZNF253O75346 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ZNF253O75346 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ZNF253O75346 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF253O75346 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF253O75346 AC135983.2-203ENST00000454486 1613 ntBASIC19.21■□□□□ 0.67
ZNF253O75346 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF253O75346 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF253O75346 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF253O75346 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF253O75346 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF253O75346 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ZNF253O75346 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF253O75346 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF253O75346 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF253O75346 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF253O75346 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF253O75346 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF253O75346 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZNF253O75346 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF253O75346 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF253O75346 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF253O75346 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF253O75346 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF253O75346 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF253O75346 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF253O75346 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF253O75346 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF253O75346 AC108673.1-201ENST00000510422 1159 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms