Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA12O60330 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHGA12O60330 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA12O60330 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
PCDHGA12O60330 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGA12O60330 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGA12O60330 ECEL1P2-201ENST00000461596 1295 ntBASIC24.94■■□□□ 1.58
PCDHGA12O60330 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
PCDHGA12O60330 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA12O60330 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGA12O60330 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDHGA12O60330 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHGA12O60330 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGA12O60330 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHGA12O60330 TSPY13P-201ENST00000338964 914 ntBASIC24.91■■□□□ 1.58
PCDHGA12O60330 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHGA12O60330 AC126177.7-201ENST00000547904 679 ntBASIC24.91■■□□□ 1.58
PCDHGA12O60330 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA12O60330 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.91■■□□□ 1.58
PCDHGA12O60330 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA12O60330 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA12O60330 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA12O60330 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA12O60330 KRT18P60-201ENST00000312876 1297 ntBASIC24.9■■□□□ 1.58
PCDHGA12O60330 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA12O60330 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PCDHGA12O60330 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA12O60330 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
PCDHGA12O60330 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
PCDHGA12O60330 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.89■■□□□ 1.58
PCDHGA12O60330 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHGA12O60330 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGA12O60330 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGA12O60330 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGA12O60330 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA12O60330 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHGA12O60330 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHGA12O60330 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGA12O60330 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA12O60330 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.88■■□□□ 1.57
PCDHGA12O60330 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
PCDHGA12O60330 ATP5G2P3-201ENST00000429083 425 ntBASIC24.87■■□□□ 1.57
PCDHGA12O60330 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGA12O60330 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGA12O60330 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHGA12O60330 AC004987.1-201ENST00000428627 508 ntBASIC24.86■■□□□ 1.57
PCDHGA12O60330 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHGA12O60330 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.85■■□□□ 1.57
PCDHGA12O60330 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHGA12O60330 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA12O60330 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA12O60330 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA12O60330 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
PCDHGA12O60330 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
PCDHGA12O60330 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
PCDHGA12O60330 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGA12O60330 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGA12O60330 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGA12O60330 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGA12O60330 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
PCDHGA12O60330 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGA12O60330 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
PCDHGA12O60330 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGA12O60330 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGA12O60330 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGA12O60330 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGA12O60330 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGA12O60330 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGA12O60330 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGA12O60330 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHGA12O60330 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA12O60330 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHGA12O60330 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA12O60330 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHGA12O60330 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA12O60330 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA12O60330 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA12O60330 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGA12O60330 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGA12O60330 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHGA12O60330 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGA12O60330 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA12O60330 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDHGA12O60330 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHGA12O60330 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA12O60330 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA12O60330 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA12O60330 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHGA12O60330 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.76■■□□□ 1.55
PCDHGA12O60330 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.76■■□□□ 1.55
PCDHGA12O60330 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHGA12O60330 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHGA12O60330 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGA12O60330 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHGA12O60330 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGA12O60330 AL157400.5-201ENST00000507624 621 ntBASIC24.75■■□□□ 1.55
PCDHGA12O60330 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PCDHGA12O60330 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGA12O60330 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGA12O60330 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms